Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CDCA5Q96FF9 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDCA5Q96FF9 HLA-J-202ENST00000469281 1241 ntBASIC20.67■□□□□ 0.9
CDCA5Q96FF9 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC20.67■□□□□ 0.9
CDCA5Q96FF9 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
CDCA5Q96FF9 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC20.67■□□□□ 0.9
CDCA5Q96FF9 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC20.67■□□□□ 0.9
CDCA5Q96FF9 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDCA5Q96FF9 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC20.67■□□□□ 0.9
CDCA5Q96FF9 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
CDCA5Q96FF9 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.67■□□□□ 0.9
CDCA5Q96FF9 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDCA5Q96FF9 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDCA5Q96FF9 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
CDCA5Q96FF9 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDCA5Q96FF9 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDCA5Q96FF9 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CDCA5Q96FF9 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDCA5Q96FF9 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
CDCA5Q96FF9 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDCA5Q96FF9 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CDCA5Q96FF9 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.67■□□□□ 0.9
CDCA5Q96FF9 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CDCA5Q96FF9 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CDCA5Q96FF9 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDCA5Q96FF9 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDCA5Q96FF9 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.66■□□□□ 0.9
CDCA5Q96FF9 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDCA5Q96FF9 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDCA5Q96FF9 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDCA5Q96FF9 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDCA5Q96FF9 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.66■□□□□ 0.9
CDCA5Q96FF9 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
CDCA5Q96FF9 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDCA5Q96FF9 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDCA5Q96FF9 HNRNPFP1-201ENST00000391730 1133 ntBASIC20.66■□□□□ 0.9
CDCA5Q96FF9 PMS2P4-201ENST00000412466 1052 ntBASIC20.66■□□□□ 0.9
CDCA5Q96FF9 ADH5P3-201ENST00000433842 1137 ntBASIC20.66■□□□□ 0.9
CDCA5Q96FF9 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC20.66■□□□□ 0.9
CDCA5Q96FF9 AC093214.1-201ENST00000511688 1107 ntBASIC20.66■□□□□ 0.9
CDCA5Q96FF9 RNA5SP421-201ENST00000516864 134 ntBASIC20.66■□□□□ 0.9
CDCA5Q96FF9 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDCA5Q96FF9 AQP6-203ENST00000551733 849 ntTSL 3 BASIC20.66■□□□□ 0.9
CDCA5Q96FF9 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDCA5Q96FF9 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC20.66■□□□□ 0.9
CDCA5Q96FF9 AC015911.4-201ENST00000588022 1070 ntBASIC20.66■□□□□ 0.9
CDCA5Q96FF9 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDCA5Q96FF9 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDCA5Q96FF9 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CDCA5Q96FF9 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC20.66■□□□□ 0.9
CDCA5Q96FF9 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC20.66■□□□□ 0.9
CDCA5Q96FF9 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.66■□□□□ 0.9
CDCA5Q96FF9 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.66■□□□□ 0.9
CDCA5Q96FF9 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDCA5Q96FF9 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDCA5Q96FF9 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CDCA5Q96FF9 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDCA5Q96FF9 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
CDCA5Q96FF9 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDCA5Q96FF9 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDCA5Q96FF9 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CDCA5Q96FF9 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDCA5Q96FF9 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDCA5Q96FF9 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDCA5Q96FF9 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDCA5Q96FF9 PI4KAP1-204ENST00000612579 1703 ntBASIC20.65■□□□□ 0.9
CDCA5Q96FF9 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.65■□□□□ 0.9
CDCA5Q96FF9 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDCA5Q96FF9 COPE-202ENST00000349893 948 ntTSL 2 BASIC20.65■□□□□ 0.9
CDCA5Q96FF9 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CDCA5Q96FF9 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC20.65■□□□□ 0.9
CDCA5Q96FF9 DDX43P3-201ENST00000441064 443 ntBASIC20.65■□□□□ 0.9
CDCA5Q96FF9 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDCA5Q96FF9 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CDCA5Q96FF9 NMU-203ENST00000507338 658 ntTSL 3 BASIC20.65■□□□□ 0.9
CDCA5Q96FF9 IGHV3OR16-6-201ENST00000568775 360 ntBASIC20.65■□□□□ 0.9
CDCA5Q96FF9 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC20.65■□□□□ 0.9
CDCA5Q96FF9 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC20.65■□□□□ 0.9
CDCA5Q96FF9 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDCA5Q96FF9 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDCA5Q96FF9 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDCA5Q96FF9 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDCA5Q96FF9 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.65■□□□□ 0.9
CDCA5Q96FF9 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.65■□□□□ 0.9
CDCA5Q96FF9 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.65■□□□□ 0.9
CDCA5Q96FF9 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC20.64■□□□□ 0.9
CDCA5Q96FF9 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDCA5Q96FF9 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDCA5Q96FF9 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDCA5Q96FF9 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.64■□□□□ 0.9
CDCA5Q96FF9 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CDCA5Q96FF9 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.64■□□□□ 0.89
CDCA5Q96FF9 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDCA5Q96FF9 AL627223.1-201ENST00000416693 442 ntBASIC20.64■□□□□ 0.89
CDCA5Q96FF9 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC20.64■□□□□ 0.89
CDCA5Q96FF9 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDCA5Q96FF9 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.64■□□□□ 0.89
CDCA5Q96FF9 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CDCA5Q96FF9 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC20.64■□□□□ 0.89
CDCA5Q96FF9 AC009093.7-201ENST00000623853 1223 ntBASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms