Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2E3Q969T4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2E3Q969T4 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.12■□□□□ 0.33
UBE2E3Q969T4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2E3Q969T4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2E3Q969T4 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.12■□□□□ 0.33
UBE2E3Q969T4 NTF6B-201ENST00000591913 560 ntBASIC17.12■□□□□ 0.33
UBE2E3Q969T4 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.12■□□□□ 0.33
UBE2E3Q969T4 PCDHB18P-201ENST00000524813 2368 ntBASIC17.12■□□□□ 0.33
UBE2E3Q969T4 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2E3Q969T4 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2E3Q969T4 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
UBE2E3Q969T4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2E3Q969T4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.12■□□□□ 0.33
UBE2E3Q969T4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2E3Q969T4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
UBE2E3Q969T4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2E3Q969T4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.11■□□□□ 0.33
UBE2E3Q969T4 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2E3Q969T4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
UBE2E3Q969T4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
UBE2E3Q969T4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.11■□□□□ 0.33
UBE2E3Q969T4 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2E3Q969T4 LINC00896-202ENST00000609602 2128 ntBASIC17.11■□□□□ 0.33
UBE2E3Q969T4 AC133963.1-201ENST00000504166 1679 ntBASIC17.11■□□□□ 0.33
UBE2E3Q969T4 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2E3Q969T4 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
UBE2E3Q969T4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2E3Q969T4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.11■□□□□ 0.33
UBE2E3Q969T4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
UBE2E3Q969T4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.11■□□□□ 0.33
UBE2E3Q969T4 KRT8P26-201ENST00000534154 1276 ntBASIC17.11■□□□□ 0.33
UBE2E3Q969T4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2E3Q969T4 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2E3Q969T4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
UBE2E3Q969T4 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.11■□□□□ 0.33
UBE2E3Q969T4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2E3Q969T4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
UBE2E3Q969T4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
UBE2E3Q969T4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2E3Q969T4 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.11■□□□□ 0.33
UBE2E3Q969T4 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2E3Q969T4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2E3Q969T4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2E3Q969T4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
UBE2E3Q969T4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2E3Q969T4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.1■□□□□ 0.33
UBE2E3Q969T4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2E3Q969T4 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2E3Q969T4 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2E3Q969T4 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2E3Q969T4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
UBE2E3Q969T4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
UBE2E3Q969T4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2E3Q969T4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
UBE2E3Q969T4 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2E3Q969T4 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2E3Q969T4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2E3Q969T4 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.1■□□□□ 0.33
UBE2E3Q969T4 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.1■□□□□ 0.33
UBE2E3Q969T4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.1■□□□□ 0.33
UBE2E3Q969T4 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.1■□□□□ 0.33
UBE2E3Q969T4 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2E3Q969T4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.1■□□□□ 0.33
UBE2E3Q969T4 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
UBE2E3Q969T4 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.1■□□□□ 0.33
UBE2E3Q969T4 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.1■□□□□ 0.33
UBE2E3Q969T4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2E3Q969T4 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2E3Q969T4 AC097374.2-201ENST00000618617 1306 ntBASIC17.1■□□□□ 0.33
UBE2E3Q969T4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.1■□□□□ 0.33
UBE2E3Q969T4 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2E3Q969T4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2E3Q969T4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.1■□□□□ 0.33
UBE2E3Q969T4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2E3Q969T4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2E3Q969T4 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.1■□□□□ 0.33
UBE2E3Q969T4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2E3Q969T4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2E3Q969T4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2E3Q969T4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBE2E3Q969T4 OR6D1P-203ENST00000641209 4860 ntBASIC17.09■□□□□ 0.33
UBE2E3Q969T4 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.09■□□□□ 0.33
UBE2E3Q969T4 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.09■□□□□ 0.33
UBE2E3Q969T4 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBE2E3Q969T4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UBE2E3Q969T4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.09■□□□□ 0.33
UBE2E3Q969T4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBE2E3Q969T4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBE2E3Q969T4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBE2E3Q969T4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBE2E3Q969T4 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.09■□□□□ 0.33
UBE2E3Q969T4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.09■□□□□ 0.33
UBE2E3Q969T4 AC096633.1-201ENST00000422446 749 ntBASIC17.09■□□□□ 0.33
UBE2E3Q969T4 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
UBE2E3Q969T4 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.09■□□□□ 0.33
UBE2E3Q969T4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.09■□□□□ 0.33
UBE2E3Q969T4 AC087388.1-201ENST00000571370 1112 ntBASIC17.09■□□□□ 0.33
UBE2E3Q969T4 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.09■□□□□ 0.33
UBE2E3Q969T4 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms