Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.11■□□□□ 0.65
SEMA4DQ92854 AC133963.1-201ENST00000504166 1679 ntBASIC19.11■□□□□ 0.65
SEMA4DQ92854 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.11■□□□□ 0.65
SEMA4DQ92854 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.11■□□□□ 0.65
SEMA4DQ92854 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SEMA4DQ92854 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.11■□□□□ 0.65
SEMA4DQ92854 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SEMA4DQ92854 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SEMA4DQ92854 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SEMA4DQ92854 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
SEMA4DQ92854 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.11■□□□□ 0.65
SEMA4DQ92854 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
SEMA4DQ92854 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SEMA4DQ92854 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.11■□□□□ 0.65
SEMA4DQ92854 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SEMA4DQ92854 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.11■□□□□ 0.65
SEMA4DQ92854 ATP5G2P1-201ENST00000433580 426 ntBASIC19.11■□□□□ 0.65
SEMA4DQ92854 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.11■□□□□ 0.65
SEMA4DQ92854 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
SEMA4DQ92854 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.11■□□□□ 0.65
SEMA4DQ92854 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SEMA4DQ92854 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.11■□□□□ 0.65
SEMA4DQ92854 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.11■□□□□ 0.65
SEMA4DQ92854 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SEMA4DQ92854 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SEMA4DQ92854 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SEMA4DQ92854 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.11■□□□□ 0.65
SEMA4DQ92854 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.11■□□□□ 0.65
SEMA4DQ92854 AC093458.2-201ENST00000623150 629 ntBASIC19.11■□□□□ 0.65
SEMA4DQ92854 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SEMA4DQ92854 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SEMA4DQ92854 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SEMA4DQ92854 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SEMA4DQ92854 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SEMA4DQ92854 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SEMA4DQ92854 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SEMA4DQ92854 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SEMA4DQ92854 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
SEMA4DQ92854 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.1■□□□□ 0.65
SEMA4DQ92854 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SEMA4DQ92854 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SEMA4DQ92854 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SEMA4DQ92854 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SEMA4DQ92854 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SEMA4DQ92854 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SEMA4DQ92854 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SEMA4DQ92854 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SEMA4DQ92854 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
SEMA4DQ92854 LINC00265-3P-201ENST00000447588 903 ntBASIC19.1■□□□□ 0.65
SEMA4DQ92854 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.1■□□□□ 0.65
SEMA4DQ92854 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.1■□□□□ 0.65
SEMA4DQ92854 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.1■□□□□ 0.65
SEMA4DQ92854 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
SEMA4DQ92854 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SEMA4DQ92854 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SEMA4DQ92854 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SEMA4DQ92854 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
SEMA4DQ92854 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SEMA4DQ92854 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SEMA4DQ92854 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SEMA4DQ92854 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SEMA4DQ92854 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SEMA4DQ92854 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SEMA4DQ92854 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
SEMA4DQ92854 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.1■□□□□ 0.65
SEMA4DQ92854 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.1■□□□□ 0.65
SEMA4DQ92854 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
SEMA4DQ92854 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SEMA4DQ92854 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
SEMA4DQ92854 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.1■□□□□ 0.65
SEMA4DQ92854 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.1■□□□□ 0.65
SEMA4DQ92854 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.1■□□□□ 0.65
SEMA4DQ92854 BX276092.7-203ENST00000637198 1536 ntBASIC19.1■□□□□ 0.65
SEMA4DQ92854 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SEMA4DQ92854 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.09■□□□□ 0.65
SEMA4DQ92854 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SEMA4DQ92854 COX5BP2-201ENST00000392354 334 ntBASIC19.09■□□□□ 0.65
SEMA4DQ92854 IGHV3-47-201ENST00000425060 335 ntBASIC19.09■□□□□ 0.65
SEMA4DQ92854 UPK3BP1-201ENST00000428678 509 ntBASIC19.09■□□□□ 0.65
SEMA4DQ92854 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.09■□□□□ 0.65
SEMA4DQ92854 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.09■□□□□ 0.65
SEMA4DQ92854 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.09■□□□□ 0.65
SEMA4DQ92854 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.09■□□□□ 0.65
SEMA4DQ92854 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.09■□□□□ 0.65
SEMA4DQ92854 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.09■□□□□ 0.65
SEMA4DQ92854 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.09■□□□□ 0.65
SEMA4DQ92854 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SEMA4DQ92854 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SEMA4DQ92854 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SEMA4DQ92854 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SEMA4DQ92854 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.09■□□□□ 0.65
SEMA4DQ92854 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SEMA4DQ92854 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.08■□□□□ 0.65
SEMA4DQ92854 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SEMA4DQ92854 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SEMA4DQ92854 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SEMA4DQ92854 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.08■□□□□ 0.65
SEMA4DQ92854 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.08■□□□□ 0.65
SEMA4DQ92854 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.08■□□□□ 0.65
SEMA4DQ92854 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms