Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RPGRQ92834 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
RPGRQ92834 CNN2P11-201ENST00000429351 262 ntBASIC21.81■■□□□ 1.08
RPGRQ92834 MKNK2P1-201ENST00000437526 628 ntBASIC21.81■■□□□ 1.08
RPGRQ92834 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RPGRQ92834 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC21.81■■□□□ 1.08
RPGRQ92834 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
RPGRQ92834 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.81■■□□□ 1.08
RPGRQ92834 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RPGRQ92834 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC21.81■■□□□ 1.08
RPGRQ92834 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC21.81■■□□□ 1.08
RPGRQ92834 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RPGRQ92834 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC21.81■■□□□ 1.08
RPGRQ92834 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RPGRQ92834 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
RPGRQ92834 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC21.8■■□□□ 1.08
RPGRQ92834 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RPGRQ92834 AC018445.3-201ENST00000624177 1945 ntBASIC21.8■■□□□ 1.08
RPGRQ92834 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPGRQ92834 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPGRQ92834 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.8■■□□□ 1.08
RPGRQ92834 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPGRQ92834 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPGRQ92834 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPGRQ92834 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RPGRQ92834 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RPGRQ92834 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC21.8■■□□□ 1.08
RPGRQ92834 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC21.8■■□□□ 1.08
RPGRQ92834 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
RPGRQ92834 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RPGRQ92834 AC010654.1-201ENST00000615722 808 ntBASIC21.8■■□□□ 1.08
RPGRQ92834 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC21.8■■□□□ 1.08
RPGRQ92834 AL805961.1-202ENST00000641562 540 ntBASIC21.8■■□□□ 1.08
RPGRQ92834 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPGRQ92834 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPGRQ92834 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPGRQ92834 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPGRQ92834 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RPGRQ92834 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC21.8■■□□□ 1.08
RPGRQ92834 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPGRQ92834 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
RPGRQ92834 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RPGRQ92834 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RPGRQ92834 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RPGRQ92834 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RPGRQ92834 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RPGRQ92834 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RPGRQ92834 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RPGRQ92834 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RPGRQ92834 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC21.79■■□□□ 1.08
RPGRQ92834 MRPL20P1-201ENST00000400819 433 ntBASIC21.79■■□□□ 1.08
RPGRQ92834 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC21.79■■□□□ 1.08
RPGRQ92834 PON3-203ENST00000427422 894 ntTSL 3 BASIC21.79■■□□□ 1.08
RPGRQ92834 CEND1P1-201ENST00000451006 455 ntBASIC21.79■■□□□ 1.08
RPGRQ92834 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
RPGRQ92834 CYMP-203ENST00000474680 1263 ntBASIC21.79■■□□□ 1.08
RPGRQ92834 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC21.79■■□□□ 1.08
RPGRQ92834 RFPL4AP1-201ENST00000530883 850 ntBASIC21.79■■□□□ 1.08
RPGRQ92834 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC21.79■■□□□ 1.08
RPGRQ92834 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC21.79■■□□□ 1.08
RPGRQ92834 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.79■■□□□ 1.08
RPGRQ92834 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RPGRQ92834 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
RPGRQ92834 PC-208ENST00000529047 1607 ntTSL 3 BASIC21.79■■□□□ 1.08
RPGRQ92834 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.79■■□□□ 1.08
RPGRQ92834 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
RPGRQ92834 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.79■■□□□ 1.08
RPGRQ92834 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RPGRQ92834 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RPGRQ92834 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RPGRQ92834 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPGRQ92834 ELL2P1-201ENST00000413990 1906 ntBASIC21.78■■□□□ 1.08
RPGRQ92834 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPGRQ92834 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPGRQ92834 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
RPGRQ92834 IGLL3P-201ENST00000412472 434 ntBASIC21.78■■□□□ 1.08
RPGRQ92834 ATP6V0CP3-201ENST00000417255 467 ntBASIC21.78■■□□□ 1.08
RPGRQ92834 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC21.78■■□□□ 1.08
RPGRQ92834 STK19B-204ENST00000512515 211 ntBASIC21.78■■□□□ 1.08
RPGRQ92834 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC21.78■■□□□ 1.08
RPGRQ92834 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC21.78■■□□□ 1.08
RPGRQ92834 AC116407.2-201ENST00000613639 860 ntBASIC21.78■■□□□ 1.08
RPGRQ92834 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC21.78■■□□□ 1.08
RPGRQ92834 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC21.78■■□□□ 1.08
RPGRQ92834 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPGRQ92834 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPGRQ92834 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPGRQ92834 AL096828.2-201ENST00000567259 1965 ntBASIC21.78■■□□□ 1.08
RPGRQ92834 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RPGRQ92834 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
RPGRQ92834 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
RPGRQ92834 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
RPGRQ92834 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.77■■□□□ 1.08
RPGRQ92834 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RPGRQ92834 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.77■■□□□ 1.08
RPGRQ92834 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RPGRQ92834 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RPGRQ92834 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.77■■□□□ 1.08
RPGRQ92834 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
RPGRQ92834 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms