Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
DDX1Q92499 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX1Q92499 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DDX1Q92499 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX1Q92499 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX1Q92499 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX1Q92499 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX1Q92499 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX1Q92499 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.92■□□□□ 0.62
DDX1Q92499 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX1Q92499 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.92■□□□□ 0.62
DDX1Q92499 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.92■□□□□ 0.62
DDX1Q92499 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.92■□□□□ 0.62
DDX1Q92499 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
DDX1Q92499 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.92■□□□□ 0.62
DDX1Q92499 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DDX1Q92499 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX1Q92499 LINC01451-201ENST00000623792 534 ntBASIC18.92■□□□□ 0.62
DDX1Q92499 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.92■□□□□ 0.62
DDX1Q92499 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.92■□□□□ 0.62
DDX1Q92499 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX1Q92499 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.92■□□□□ 0.62
DDX1Q92499 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX1Q92499 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.92■□□□□ 0.62
DDX1Q92499 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
DDX1Q92499 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DDX1Q92499 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
DDX1Q92499 AC108860.2-201ENST00000562760 2183 ntBASIC18.92■□□□□ 0.62
DDX1Q92499 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DDX1Q92499 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.92■□□□□ 0.62
DDX1Q92499 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX1Q92499 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX1Q92499 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
DDX1Q92499 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.91■□□□□ 0.62
DDX1Q92499 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DDX1Q92499 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
DDX1Q92499 AL138688.1-201ENST00000624851 1594 ntBASIC18.91■□□□□ 0.62
DDX1Q92499 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.91■□□□□ 0.62
DDX1Q92499 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX1Q92499 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.91■□□□□ 0.62
DDX1Q92499 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.91■□□□□ 0.62
DDX1Q92499 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
DDX1Q92499 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DDX1Q92499 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.91■□□□□ 0.62
DDX1Q92499 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX1Q92499 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX1Q92499 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.91■□□□□ 0.62
DDX1Q92499 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX1Q92499 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX1Q92499 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DDX1Q92499 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX1Q92499 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX1Q92499 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX1Q92499 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DDX1Q92499 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX1Q92499 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.9■□□□□ 0.62
DDX1Q92499 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.9■□□□□ 0.62
DDX1Q92499 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX1Q92499 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX1Q92499 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DDX1Q92499 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
DDX1Q92499 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX1Q92499 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
DDX1Q92499 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DDX1Q92499 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
DDX1Q92499 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
DDX1Q92499 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX1Q92499 NUS1P1-201ENST00000446295 882 ntBASIC18.9■□□□□ 0.62
DDX1Q92499 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.9■□□□□ 0.62
DDX1Q92499 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.9■□□□□ 0.62
DDX1Q92499 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.9■□□□□ 0.62
DDX1Q92499 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.9■□□□□ 0.62
DDX1Q92499 LINC01711-201ENST00000598340 967 ntBASIC18.9■□□□□ 0.62
DDX1Q92499 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.9■□□□□ 0.62
DDX1Q92499 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
DDX1Q92499 AC097374.2-201ENST00000618617 1306 ntBASIC18.9■□□□□ 0.62
DDX1Q92499 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.9■□□□□ 0.62
DDX1Q92499 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX1Q92499 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.9■□□□□ 0.62
DDX1Q92499 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.9■□□□□ 0.62
DDX1Q92499 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
DDX1Q92499 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX1Q92499 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX1Q92499 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX1Q92499 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.9■□□□□ 0.62
DDX1Q92499 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
DDX1Q92499 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
DDX1Q92499 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.89■□□□□ 0.62
DDX1Q92499 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
DDX1Q92499 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
DDX1Q92499 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.89■□□□□ 0.61
DDX1Q92499 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DDX1Q92499 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX1Q92499 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DDX1Q92499 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX1Q92499 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX1Q92499 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX1Q92499 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.89■□□□□ 0.61
DDX1Q92499 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.89■□□□□ 0.61
DDX1Q92499 AC005104.2-201ENST00000427818 678 ntBASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms