Protein–RNA interactions for Protein: Q8NF99

ZNF397, Zinc finger protein 397, humanhuman

Predicted RBP Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF397Q8NF99 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
ZNF397Q8NF99 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
ZNF397Q8NF99 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF397Q8NF99 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
ZNF397Q8NF99 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.72■□□□□ 0.75
ZNF397Q8NF99 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.72■□□□□ 0.75
ZNF397Q8NF99 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.72■□□□□ 0.75
ZNF397Q8NF99 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF397Q8NF99 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF397Q8NF99 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.72■□□□□ 0.75
ZNF397Q8NF99 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.72■□□□□ 0.75
ZNF397Q8NF99 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF397Q8NF99 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF397Q8NF99 OR6D1P-203ENST00000641209 4860 ntBASIC19.71■□□□□ 0.75
ZNF397Q8NF99 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF397Q8NF99 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF397Q8NF99 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF397Q8NF99 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF397Q8NF99 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.71■□□□□ 0.75
ZNF397Q8NF99 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
ZNF397Q8NF99 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ZNF397Q8NF99 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF397Q8NF99 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF397Q8NF99 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF397Q8NF99 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ZNF397Q8NF99 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF397Q8NF99 AC087499.1-201ENST00000418141 1075 ntBASIC19.71■□□□□ 0.75
ZNF397Q8NF99 AC007663.1-201ENST00000438948 1240 ntBASIC19.71■□□□□ 0.75
ZNF397Q8NF99 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.71■□□□□ 0.75
ZNF397Q8NF99 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF397Q8NF99 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.71■□□□□ 0.75
ZNF397Q8NF99 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.71■□□□□ 0.75
ZNF397Q8NF99 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.71■□□□□ 0.75
ZNF397Q8NF99 AC010653.2-201ENST00000623505 997 ntBASIC19.71■□□□□ 0.75
ZNF397Q8NF99 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
ZNF397Q8NF99 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF397Q8NF99 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.71■□□□□ 0.75
ZNF397Q8NF99 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF397Q8NF99 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF397Q8NF99 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF397Q8NF99 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF397Q8NF99 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.71■□□□□ 0.75
ZNF397Q8NF99 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ZNF397Q8NF99 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF397Q8NF99 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF397Q8NF99 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF397Q8NF99 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF397Q8NF99 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF397Q8NF99 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
ZNF397Q8NF99 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF397Q8NF99 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF397Q8NF99 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF397Q8NF99 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF397Q8NF99 LINC01126-201ENST00000623515 1646 ntBASIC19.7■□□□□ 0.74
ZNF397Q8NF99 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF397Q8NF99 UBALD1-205ENST00000590891 2641 ntBASIC19.7■□□□□ 0.74
ZNF397Q8NF99 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.7■□□□□ 0.74
ZNF397Q8NF99 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ZNF397Q8NF99 AP003041.3-201ENST00000527151 707 ntBASIC19.7■□□□□ 0.74
ZNF397Q8NF99 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.7■□□□□ 0.74
ZNF397Q8NF99 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.7■□□□□ 0.74
ZNF397Q8NF99 WWOX-216ENST00000569818 525 ntBASIC19.7■□□□□ 0.74
ZNF397Q8NF99 MIR3180-4-201ENST00000582223 153 ntBASIC19.7■□□□□ 0.74
ZNF397Q8NF99 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF397Q8NF99 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF397Q8NF99 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.7■□□□□ 0.74
ZNF397Q8NF99 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF397Q8NF99 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
ZNF397Q8NF99 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF397Q8NF99 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
ZNF397Q8NF99 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.7■□□□□ 0.74
ZNF397Q8NF99 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF397Q8NF99 PCDH8P1-201ENST00000428983 2773 ntBASIC19.7■□□□□ 0.74
ZNF397Q8NF99 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF397Q8NF99 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.69■□□□□ 0.74
ZNF397Q8NF99 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF397Q8NF99 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF397Q8NF99 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ZNF397Q8NF99 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF397Q8NF99 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF397Q8NF99 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF397Q8NF99 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.69■□□□□ 0.74
ZNF397Q8NF99 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.69■□□□□ 0.74
ZNF397Q8NF99 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.69■□□□□ 0.74
ZNF397Q8NF99 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
ZNF397Q8NF99 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.69■□□□□ 0.74
ZNF397Q8NF99 CR769767.2-201ENST00000622735 460 ntBASIC19.69■□□□□ 0.74
ZNF397Q8NF99 AC073912.3-201ENST00000624414 853 ntBASIC19.69■□□□□ 0.74
ZNF397Q8NF99 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF397Q8NF99 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.69■□□□□ 0.74
ZNF397Q8NF99 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF397Q8NF99 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF397Q8NF99 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF397Q8NF99 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC19.69■□□□□ 0.74
ZNF397Q8NF99 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.69■□□□□ 0.74
ZNF397Q8NF99 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
ZNF397Q8NF99 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF397Q8NF99 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF397Q8NF99 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.68■□□□□ 0.74
ZNF397Q8NF99 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms