Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SYNPOQ8N3V7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
SYNPOQ8N3V7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.03■□□□□ 0.48
SYNPOQ8N3V7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SYNPOQ8N3V7 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SYNPOQ8N3V7 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SYNPOQ8N3V7 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SYNPOQ8N3V7 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SYNPOQ8N3V7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SYNPOQ8N3V7 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SYNPOQ8N3V7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SYNPOQ8N3V7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SYNPOQ8N3V7 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.03■□□□□ 0.48
SYNPOQ8N3V7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SYNPOQ8N3V7 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SYNPOQ8N3V7 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.03■□□□□ 0.48
SYNPOQ8N3V7 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.03■□□□□ 0.48
SYNPOQ8N3V7 AC108751.1-201ENST00000490852 363 ntBASIC18.03■□□□□ 0.48
SYNPOQ8N3V7 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.03■□□□□ 0.48
SYNPOQ8N3V7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.03■□□□□ 0.48
SYNPOQ8N3V7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.03■□□□□ 0.48
SYNPOQ8N3V7 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.03■□□□□ 0.48
SYNPOQ8N3V7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.03■□□□□ 0.48
SYNPOQ8N3V7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.03■□□□□ 0.48
SYNPOQ8N3V7 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.03■□□□□ 0.48
SYNPOQ8N3V7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SYNPOQ8N3V7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.03■□□□□ 0.48
SYNPOQ8N3V7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SYNPOQ8N3V7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SYNPOQ8N3V7 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SYNPOQ8N3V7 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SYNPOQ8N3V7 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
SYNPOQ8N3V7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
SYNPOQ8N3V7 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.03■□□□□ 0.48
SYNPOQ8N3V7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.03■□□□□ 0.48
SYNPOQ8N3V7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SYNPOQ8N3V7 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SYNPOQ8N3V7 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SYNPOQ8N3V7 AC009113.1-201ENST00000570267 2443 ntBASIC18.02■□□□□ 0.48
SYNPOQ8N3V7 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
SYNPOQ8N3V7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
SYNPOQ8N3V7 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
SYNPOQ8N3V7 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SYNPOQ8N3V7 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
SYNPOQ8N3V7 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SYNPOQ8N3V7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SYNPOQ8N3V7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.02■□□□□ 0.48
SYNPOQ8N3V7 SPDYE21P-201ENST00000413323 827 ntBASIC18.02■□□□□ 0.48
SYNPOQ8N3V7 AC023274.1-201ENST00000418278 595 ntBASIC18.02■□□□□ 0.48
SYNPOQ8N3V7 DNAJB3-202ENST00000449667 1266 ntBASIC18.02■□□□□ 0.48
SYNPOQ8N3V7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.02■□□□□ 0.48
SYNPOQ8N3V7 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.02■□□□□ 0.48
SYNPOQ8N3V7 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.02■□□□□ 0.48
SYNPOQ8N3V7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.02■□□□□ 0.48
SYNPOQ8N3V7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.02■□□□□ 0.48
SYNPOQ8N3V7 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.02■□□□□ 0.48
SYNPOQ8N3V7 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.02■□□□□ 0.48
SYNPOQ8N3V7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.02■□□□□ 0.48
SYNPOQ8N3V7 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.02■□□□□ 0.48
SYNPOQ8N3V7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SYNPOQ8N3V7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.48
SYNPOQ8N3V7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SYNPOQ8N3V7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SYNPOQ8N3V7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.02■□□□□ 0.47
SYNPOQ8N3V7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
SYNPOQ8N3V7 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.02■□□□□ 0.47
SYNPOQ8N3V7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SYNPOQ8N3V7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
SYNPOQ8N3V7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.02■□□□□ 0.47
SYNPOQ8N3V7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SYNPOQ8N3V7 AL499627.1-201ENST00000569373 2188 ntBASIC18.01■□□□□ 0.47
SYNPOQ8N3V7 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SYNPOQ8N3V7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SYNPOQ8N3V7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SYNPOQ8N3V7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SYNPOQ8N3V7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.01■□□□□ 0.47
SYNPOQ8N3V7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SYNPOQ8N3V7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SYNPOQ8N3V7 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.01■□□□□ 0.47
SYNPOQ8N3V7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SYNPOQ8N3V7 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.01■□□□□ 0.47
SYNPOQ8N3V7 AC104581.1-202ENST00000635932 2618 ntBASIC18.01■□□□□ 0.47
SYNPOQ8N3V7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SYNPOQ8N3V7 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.01■□□□□ 0.47
SYNPOQ8N3V7 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.01■□□□□ 0.47
SYNPOQ8N3V7 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.01■□□□□ 0.47
SYNPOQ8N3V7 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.01■□□□□ 0.47
SYNPOQ8N3V7 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.01■□□□□ 0.47
SYNPOQ8N3V7 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.01■□□□□ 0.47
SYNPOQ8N3V7 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SYNPOQ8N3V7 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.01■□□□□ 0.47
SYNPOQ8N3V7 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.01■□□□□ 0.47
SYNPOQ8N3V7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SYNPOQ8N3V7 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.01■□□□□ 0.47
SYNPOQ8N3V7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SYNPOQ8N3V7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SYNPOQ8N3V7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.01■□□□□ 0.47
SYNPOQ8N3V7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SYNPOQ8N3V7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SYNPOQ8N3V7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms