Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KRT78Q8N1N4 AC006116.8-202ENST00000587620 1550 ntBASIC17.2■□□□□ 0.34
KRT78Q8N1N4 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT78Q8N1N4 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
KRT78Q8N1N4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KRT78Q8N1N4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.2■□□□□ 0.34
KRT78Q8N1N4 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT78Q8N1N4 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT78Q8N1N4 MTCL1P1-201ENST00000446207 792 ntBASIC17.2■□□□□ 0.34
KRT78Q8N1N4 AC068472.1-201ENST00000474589 881 ntBASIC17.2■□□□□ 0.34
KRT78Q8N1N4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.2■□□□□ 0.34
KRT78Q8N1N4 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.2■□□□□ 0.34
KRT78Q8N1N4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.2■□□□□ 0.34
KRT78Q8N1N4 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.2■□□□□ 0.34
KRT78Q8N1N4 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.2■□□□□ 0.34
KRT78Q8N1N4 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KRT78Q8N1N4 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT78Q8N1N4 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.2■□□□□ 0.34
KRT78Q8N1N4 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT78Q8N1N4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT78Q8N1N4 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KRT78Q8N1N4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KRT78Q8N1N4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.2■□□□□ 0.34
KRT78Q8N1N4 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT78Q8N1N4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT78Q8N1N4 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.19■□□□□ 0.34
KRT78Q8N1N4 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KRT78Q8N1N4 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
KRT78Q8N1N4 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.19■□□□□ 0.34
KRT78Q8N1N4 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KRT78Q8N1N4 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
KRT78Q8N1N4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.19■□□□□ 0.34
KRT78Q8N1N4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.19■□□□□ 0.34
KRT78Q8N1N4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT78Q8N1N4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KRT78Q8N1N4 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KRT78Q8N1N4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT78Q8N1N4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT78Q8N1N4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.19■□□□□ 0.34
KRT78Q8N1N4 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
KRT78Q8N1N4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.19■□□□□ 0.34
KRT78Q8N1N4 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT78Q8N1N4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.19■□□□□ 0.34
KRT78Q8N1N4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.19■□□□□ 0.34
KRT78Q8N1N4 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.19■□□□□ 0.34
KRT78Q8N1N4 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
KRT78Q8N1N4 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.19■□□□□ 0.34
KRT78Q8N1N4 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.19■□□□□ 0.34
KRT78Q8N1N4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
KRT78Q8N1N4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT78Q8N1N4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.19■□□□□ 0.34
KRT78Q8N1N4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
KRT78Q8N1N4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
KRT78Q8N1N4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KRT78Q8N1N4 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.19■□□□□ 0.34
KRT78Q8N1N4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.19■□□□□ 0.34
KRT78Q8N1N4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT78Q8N1N4 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
KRT78Q8N1N4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KRT78Q8N1N4 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT78Q8N1N4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.19■□□□□ 0.34
KRT78Q8N1N4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
KRT78Q8N1N4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
KRT78Q8N1N4 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.19■□□□□ 0.34
KRT78Q8N1N4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
KRT78Q8N1N4 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT78Q8N1N4 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
KRT78Q8N1N4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
KRT78Q8N1N4 AC012317.2-201ENST00000623305 2251 ntBASIC17.18■□□□□ 0.34
KRT78Q8N1N4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT78Q8N1N4 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
KRT78Q8N1N4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
KRT78Q8N1N4 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
KRT78Q8N1N4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT78Q8N1N4 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT78Q8N1N4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT78Q8N1N4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT78Q8N1N4 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT78Q8N1N4 DDX43P3-201ENST00000441064 443 ntBASIC17.18■□□□□ 0.34
KRT78Q8N1N4 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
KRT78Q8N1N4 KRT8P26-201ENST00000534154 1276 ntBASIC17.18■□□□□ 0.34
KRT78Q8N1N4 AC090616.6-201ENST00000582640 721 ntBASIC17.18■□□□□ 0.34
KRT78Q8N1N4 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
KRT78Q8N1N4 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT78Q8N1N4 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.18■□□□□ 0.34
KRT78Q8N1N4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
KRT78Q8N1N4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT78Q8N1N4 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT78Q8N1N4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
KRT78Q8N1N4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
KRT78Q8N1N4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.18■□□□□ 0.34
KRT78Q8N1N4 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT78Q8N1N4 AC005332.1-201ENST00000577698 1310 ntBASIC17.18■□□□□ 0.34
KRT78Q8N1N4 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.18■□□□□ 0.34
KRT78Q8N1N4 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT78Q8N1N4 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT78Q8N1N4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
KRT78Q8N1N4 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT78Q8N1N4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT78Q8N1N4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms