Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SIX5Q8N196 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SIX5Q8N196 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SIX5Q8N196 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIX5Q8N196 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SIX5Q8N196 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIX5Q8N196 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIX5Q8N196 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIX5Q8N196 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.18■□□□□ 0.5
SIX5Q8N196 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.18■□□□□ 0.5
SIX5Q8N196 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIX5Q8N196 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIX5Q8N196 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIX5Q8N196 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SIX5Q8N196 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SIX5Q8N196 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.17■□□□□ 0.5
SIX5Q8N196 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIX5Q8N196 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIX5Q8N196 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIX5Q8N196 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIX5Q8N196 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIX5Q8N196 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SIX5Q8N196 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SIX5Q8N196 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.17■□□□□ 0.5
SIX5Q8N196 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.17■□□□□ 0.5
SIX5Q8N196 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.17■□□□□ 0.5
SIX5Q8N196 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.17■□□□□ 0.5
SIX5Q8N196 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.17■□□□□ 0.5
SIX5Q8N196 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.17■□□□□ 0.5
SIX5Q8N196 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.17■□□□□ 0.5
SIX5Q8N196 AC027612.4-201ENST00000605371 583 ntBASIC18.17■□□□□ 0.5
SIX5Q8N196 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SIX5Q8N196 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIX5Q8N196 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SIX5Q8N196 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
SIX5Q8N196 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.17■□□□□ 0.5
SIX5Q8N196 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIX5Q8N196 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIX5Q8N196 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SIX5Q8N196 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
SIX5Q8N196 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SIX5Q8N196 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.17■□□□□ 0.5
SIX5Q8N196 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SIX5Q8N196 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIX5Q8N196 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SIX5Q8N196 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
SIX5Q8N196 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SIX5Q8N196 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIX5Q8N196 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.16■□□□□ 0.5
SIX5Q8N196 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIX5Q8N196 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.16■□□□□ 0.5
SIX5Q8N196 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SIX5Q8N196 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIX5Q8N196 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.16■□□□□ 0.5
SIX5Q8N196 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIX5Q8N196 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIX5Q8N196 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SIX5Q8N196 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
SIX5Q8N196 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SIX5Q8N196 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIX5Q8N196 SPDYE21P-201ENST00000413323 827 ntBASIC18.16■□□□□ 0.5
SIX5Q8N196 AC108073.2-201ENST00000464002 357 ntBASIC18.16■□□□□ 0.5
SIX5Q8N196 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.16■□□□□ 0.5
SIX5Q8N196 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.16■□□□□ 0.5
SIX5Q8N196 AL589182.2-201ENST00000619332 1049 ntBASIC18.16■□□□□ 0.5
SIX5Q8N196 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.16■□□□□ 0.5
SIX5Q8N196 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SIX5Q8N196 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIX5Q8N196 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIX5Q8N196 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.15■□□□□ 0.5
SIX5Q8N196 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SIX5Q8N196 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SIX5Q8N196 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SIX5Q8N196 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SIX5Q8N196 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SIX5Q8N196 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SIX5Q8N196 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SIX5Q8N196 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SIX5Q8N196 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.15■□□□□ 0.5
SIX5Q8N196 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SIX5Q8N196 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SIX5Q8N196 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.15■□□□□ 0.5
SIX5Q8N196 ELK2BP-201ENST00000415014 1224 ntBASIC18.15■□□□□ 0.5
SIX5Q8N196 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.15■□□□□ 0.5
SIX5Q8N196 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SIX5Q8N196 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SIX5Q8N196 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
SIX5Q8N196 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SIX5Q8N196 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.15■□□□□ 0.5
SIX5Q8N196 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SIX5Q8N196 AL032819.2-201ENST00000624543 2162 ntBASIC18.15■□□□□ 0.5
SIX5Q8N196 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SIX5Q8N196 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SIX5Q8N196 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.15■□□□□ 0.5
SIX5Q8N196 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SIX5Q8N196 SIGLEC16-201ENST00000599858 1437 ntBASIC18.15■□□□□ 0.5
SIX5Q8N196 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SIX5Q8N196 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SIX5Q8N196 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SIX5Q8N196 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.14■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms