Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE9Q8IYJ1 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE9Q8IYJ1 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE9Q8IYJ1 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE9Q8IYJ1 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE9Q8IYJ1 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.62■□□□□ 0.41
CPNE9Q8IYJ1 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE9Q8IYJ1 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE9Q8IYJ1 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE9Q8IYJ1 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CPNE9Q8IYJ1 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE9Q8IYJ1 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.62■□□□□ 0.41
CPNE9Q8IYJ1 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE9Q8IYJ1 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.62■□□□□ 0.41
CPNE9Q8IYJ1 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
CPNE9Q8IYJ1 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.62■□□□□ 0.41
CPNE9Q8IYJ1 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE9Q8IYJ1 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE9Q8IYJ1 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE9Q8IYJ1 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.62■□□□□ 0.41
CPNE9Q8IYJ1 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.62■□□□□ 0.41
CPNE9Q8IYJ1 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.62■□□□□ 0.41
CPNE9Q8IYJ1 AL390719.2-201ENST00000606993 987 ntBASIC17.62■□□□□ 0.41
CPNE9Q8IYJ1 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.62■□□□□ 0.41
CPNE9Q8IYJ1 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.62■□□□□ 0.41
CPNE9Q8IYJ1 AC009949.1-201ENST00000623048 1830 ntBASIC17.62■□□□□ 0.41
CPNE9Q8IYJ1 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.62■□□□□ 0.41
CPNE9Q8IYJ1 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE9Q8IYJ1 AC124067.4-201ENST00000519691 2379 ntBASIC17.62■□□□□ 0.41
CPNE9Q8IYJ1 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE9Q8IYJ1 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE9Q8IYJ1 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE9Q8IYJ1 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.62■□□□□ 0.41
CPNE9Q8IYJ1 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE9Q8IYJ1 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE9Q8IYJ1 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE9Q8IYJ1 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.62■□□□□ 0.41
CPNE9Q8IYJ1 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.62■□□□□ 0.41
CPNE9Q8IYJ1 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE9Q8IYJ1 Z83836.1-201ENST00000624605 1642 ntBASIC17.61■□□□□ 0.41
CPNE9Q8IYJ1 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE9Q8IYJ1 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE9Q8IYJ1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE9Q8IYJ1 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE9Q8IYJ1 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.61■□□□□ 0.41
CPNE9Q8IYJ1 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CPNE9Q8IYJ1 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE9Q8IYJ1 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE9Q8IYJ1 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.61■□□□□ 0.41
CPNE9Q8IYJ1 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.61■□□□□ 0.41
CPNE9Q8IYJ1 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.61■□□□□ 0.41
CPNE9Q8IYJ1 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE9Q8IYJ1 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.61■□□□□ 0.41
CPNE9Q8IYJ1 AL355312.1-201ENST00000407115 2176 ntBASIC17.61■□□□□ 0.41
CPNE9Q8IYJ1 PRORSD1P-202ENST00000563365 2154 ntBASIC17.61■□□□□ 0.41
CPNE9Q8IYJ1 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE9Q8IYJ1 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE9Q8IYJ1 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE9Q8IYJ1 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.61■□□□□ 0.41
CPNE9Q8IYJ1 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CPNE9Q8IYJ1 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.61■□□□□ 0.41
CPNE9Q8IYJ1 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE9Q8IYJ1 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.61■□□□□ 0.41
CPNE9Q8IYJ1 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.61■□□□□ 0.41
CPNE9Q8IYJ1 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE9Q8IYJ1 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE9Q8IYJ1 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CPNE9Q8IYJ1 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE9Q8IYJ1 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.6■□□□□ 0.41
CPNE9Q8IYJ1 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE9Q8IYJ1 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE9Q8IYJ1 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE9Q8IYJ1 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.6■□□□□ 0.41
CPNE9Q8IYJ1 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE9Q8IYJ1 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE9Q8IYJ1 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.6■□□□□ 0.41
CPNE9Q8IYJ1 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE9Q8IYJ1 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE9Q8IYJ1 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE9Q8IYJ1 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE9Q8IYJ1 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.6■□□□□ 0.41
CPNE9Q8IYJ1 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE9Q8IYJ1 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CPNE9Q8IYJ1 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.6■□□□□ 0.41
CPNE9Q8IYJ1 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.6■□□□□ 0.41
CPNE9Q8IYJ1 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.6■□□□□ 0.41
CPNE9Q8IYJ1 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.6■□□□□ 0.41
CPNE9Q8IYJ1 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms