Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 HLA-J-202ENST00000469281 1241 ntBASIC21.48■■□□□ 1.03
SLX4Q8IY92 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC21.48■■□□□ 1.03
SLX4Q8IY92 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC21.48■■□□□ 1.03
SLX4Q8IY92 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC21.48■■□□□ 1.03
SLX4Q8IY92 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLX4Q8IY92 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLX4Q8IY92 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLX4Q8IY92 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLX4Q8IY92 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SLX4Q8IY92 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLX4Q8IY92 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.47■■□□□ 1.03
SLX4Q8IY92 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
SLX4Q8IY92 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SLX4Q8IY92 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC21.47■■□□□ 1.03
SLX4Q8IY92 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLX4Q8IY92 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC21.47■■□□□ 1.03
SLX4Q8IY92 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SLX4Q8IY92 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLX4Q8IY92 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLX4Q8IY92 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLX4Q8IY92 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC21.47■■□□□ 1.03
SLX4Q8IY92 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
SLX4Q8IY92 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC21.47■■□□□ 1.03
SLX4Q8IY92 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SLX4Q8IY92 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
SLX4Q8IY92 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC21.47■■□□□ 1.03
SLX4Q8IY92 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC21.47■■□□□ 1.03
SLX4Q8IY92 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC21.47■■□□□ 1.03
SLX4Q8IY92 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC21.47■■□□□ 1.03
SLX4Q8IY92 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC21.47■■□□□ 1.03
SLX4Q8IY92 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLX4Q8IY92 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLX4Q8IY92 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SLX4Q8IY92 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
SLX4Q8IY92 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
SLX4Q8IY92 AL121761.2-201ENST00000598007 1648 ntBASIC21.47■■□□□ 1.03
SLX4Q8IY92 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC21.47■■□□□ 1.03
SLX4Q8IY92 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLX4Q8IY92 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLX4Q8IY92 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
SLX4Q8IY92 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLX4Q8IY92 MIR661-201ENST00000384842 89 ntBASIC21.46■■□□□ 1.03
SLX4Q8IY92 HLA-DRB6-201ENST00000411500 1235 ntBASIC21.46■■□□□ 1.03
SLX4Q8IY92 FAM86GP-201ENST00000448322 971 ntBASIC21.46■■□□□ 1.03
SLX4Q8IY92 AL513480.1-201ENST00000451731 511 ntBASIC21.46■■□□□ 1.03
SLX4Q8IY92 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLX4Q8IY92 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC21.46■■□□□ 1.03
SLX4Q8IY92 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLX4Q8IY92 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC21.46■■□□□ 1.03
SLX4Q8IY92 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC21.46■■□□□ 1.03
SLX4Q8IY92 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
SLX4Q8IY92 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLX4Q8IY92 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC21.46■■□□□ 1.03
SLX4Q8IY92 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLX4Q8IY92 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SLX4Q8IY92 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SLX4Q8IY92 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLX4Q8IY92 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLX4Q8IY92 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.46■■□□□ 1.03
SLX4Q8IY92 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC21.46■■□□□ 1.03
SLX4Q8IY92 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.03
SLX4Q8IY92 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC21.45■■□□□ 1.03
SLX4Q8IY92 RBM7-207ENST00000544582 692 ntTSL 3 BASIC21.45■■□□□ 1.03
SLX4Q8IY92 AQP6-203ENST00000551733 849 ntTSL 3 BASIC21.45■■□□□ 1.03
SLX4Q8IY92 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC21.45■■□□□ 1.03
SLX4Q8IY92 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
SLX4Q8IY92 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
SLX4Q8IY92 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
SLX4Q8IY92 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.45■■□□□ 1.03
SLX4Q8IY92 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLX4Q8IY92 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC21.45■■□□□ 1.02
SLX4Q8IY92 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLX4Q8IY92 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SLX4Q8IY92 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SLX4Q8IY92 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SLX4Q8IY92 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLX4Q8IY92 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.45■■□□□ 1.02
SLX4Q8IY92 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.45■■□□□ 1.02
SLX4Q8IY92 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLX4Q8IY92 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLX4Q8IY92 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
SLX4Q8IY92 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC21.45■■□□□ 1.02
SLX4Q8IY92 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SLX4Q8IY92 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLX4Q8IY92 NMU-203ENST00000507338 658 ntTSL 3 BASIC21.45■■□□□ 1.02
SLX4Q8IY92 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
SLX4Q8IY92 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.45■■□□□ 1.02
SLX4Q8IY92 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC21.45■■□□□ 1.02
SLX4Q8IY92 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SLX4Q8IY92 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.44■■□□□ 1.02
SLX4Q8IY92 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
SLX4Q8IY92 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLX4Q8IY92 AL096828.2-201ENST00000567259 1965 ntBASIC21.44■■□□□ 1.02
SLX4Q8IY92 AC092474.2-201ENST00000424288 719 ntBASIC21.44■■□□□ 1.02
SLX4Q8IY92 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC21.44■■□□□ 1.02
SLX4Q8IY92 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC21.44■■□□□ 1.02
SLX4Q8IY92 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC21.44■■□□□ 1.02
SLX4Q8IY92 KRT8P48-201ENST00000515599 1220 ntBASIC21.44■■□□□ 1.02
SLX4Q8IY92 AC025678.2-201ENST00000562061 970 ntBASIC21.44■■□□□ 1.02
SLX4Q8IY92 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms