Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.01■□□□□ 0.31
RAB43Q86YS6 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.01■□□□□ 0.31
RAB43Q86YS6 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB43Q86YS6 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB43Q86YS6 MYLKP1-201ENST00000509077 1580 ntBASIC17.01■□□□□ 0.31
RAB43Q86YS6 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB43Q86YS6 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB43Q86YS6 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.01■□□□□ 0.31
RAB43Q86YS6 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB43Q86YS6 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RAB43Q86YS6 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB43Q86YS6 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAB43Q86YS6 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAB43Q86YS6 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAB43Q86YS6 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RAB43Q86YS6 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RAB43Q86YS6 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RAB43Q86YS6 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB43Q86YS6 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17■□□□□ 0.31
RAB43Q86YS6 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAB43Q86YS6 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
RAB43Q86YS6 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAB43Q86YS6 AC079781.3-201ENST00000449110 356 ntBASIC17■□□□□ 0.31
RAB43Q86YS6 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17■□□□□ 0.31
RAB43Q86YS6 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17■□□□□ 0.31
RAB43Q86YS6 AL662844.1-201ENST00000546340 181 ntBASIC17■□□□□ 0.31
RAB43Q86YS6 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17■□□□□ 0.31
RAB43Q86YS6 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAB43Q86YS6 AL121912.1-201ENST00000603683 238 ntBASIC17■□□□□ 0.31
RAB43Q86YS6 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
RAB43Q86YS6 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB43Q86YS6 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17■□□□□ 0.31
RAB43Q86YS6 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB43Q86YS6 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RAB43Q86YS6 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RAB43Q86YS6 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17■□□□□ 0.31
RAB43Q86YS6 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
RAB43Q86YS6 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17■□□□□ 0.31
RAB43Q86YS6 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RAB43Q86YS6 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.99■□□□□ 0.31
RAB43Q86YS6 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.99■□□□□ 0.31
RAB43Q86YS6 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB43Q86YS6 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.99■□□□□ 0.31
RAB43Q86YS6 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RAB43Q86YS6 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
RAB43Q86YS6 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
RAB43Q86YS6 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RAB43Q86YS6 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RAB43Q86YS6 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB43Q86YS6 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.99■□□□□ 0.31
RAB43Q86YS6 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RAB43Q86YS6 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RAB43Q86YS6 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB43Q86YS6 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.99■□□□□ 0.31
RAB43Q86YS6 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RAB43Q86YS6 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB43Q86YS6 SAPCD2P3-201ENST00000455031 850 ntBASIC16.99■□□□□ 0.31
RAB43Q86YS6 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.99■□□□□ 0.31
RAB43Q86YS6 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB43Q86YS6 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.99■□□□□ 0.31
RAB43Q86YS6 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
RAB43Q86YS6 AP005901.3-202ENST00000581653 237 ntBASIC16.99■□□□□ 0.31
RAB43Q86YS6 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.99■□□□□ 0.31
RAB43Q86YS6 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.99■□□□□ 0.31
RAB43Q86YS6 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB43Q86YS6 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RAB43Q86YS6 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
RAB43Q86YS6 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB43Q86YS6 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.99■□□□□ 0.31
RAB43Q86YS6 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.99■□□□□ 0.31
RAB43Q86YS6 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB43Q86YS6 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB43Q86YS6 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.99■□□□□ 0.31
RAB43Q86YS6 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB43Q86YS6 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB43Q86YS6 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RAB43Q86YS6 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.99■□□□□ 0.31
RAB43Q86YS6 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
RAB43Q86YS6 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB43Q86YS6 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB43Q86YS6 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB43Q86YS6 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.99■□□□□ 0.31
RAB43Q86YS6 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB43Q86YS6 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB43Q86YS6 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB43Q86YS6 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB43Q86YS6 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB43Q86YS6 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.98■□□□□ 0.31
RAB43Q86YS6 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB43Q86YS6 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB43Q86YS6 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB43Q86YS6 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB43Q86YS6 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RAB43Q86YS6 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB43Q86YS6 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB43Q86YS6 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB43Q86YS6 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RAB43Q86YS6 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.98■□□□□ 0.31
RAB43Q86YS6 AC009078.2-202ENST00000463353 338 ntBASIC16.98■□□□□ 0.31
RAB43Q86YS6 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms