Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRTM1Q86UE6 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.46■□□□□ 0.07
LRRTM1Q86UE6 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.46■□□□□ 0.07
LRRTM1Q86UE6 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC15.46■□□□□ 0.07
LRRTM1Q86UE6 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.46■□□□□ 0.07
LRRTM1Q86UE6 AC116407.2-201ENST00000613639 860 ntBASIC15.46■□□□□ 0.07
LRRTM1Q86UE6 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
LRRTM1Q86UE6 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRTM1Q86UE6 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRTM1Q86UE6 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRTM1Q86UE6 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
LRRTM1Q86UE6 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
LRRTM1Q86UE6 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
LRRTM1Q86UE6 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
LRRTM1Q86UE6 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 ABHD17AP1-201ENST00000358206 933 ntBASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 KRT18P29-201ENST00000397031 1267 ntBASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 AC113410.3-201ENST00000623366 203 ntBASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 DECR2-212ENST00000627716 352 ntTSL 2 BASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
LRRTM1Q86UE6 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRTM1Q86UE6 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRTM1Q86UE6 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRTM1Q86UE6 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRTM1Q86UE6 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRTM1Q86UE6 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
LRRTM1Q86UE6 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRTM1Q86UE6 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.44■□□□□ 0.06
LRRTM1Q86UE6 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
LRRTM1Q86UE6 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRTM1Q86UE6 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
LRRTM1Q86UE6 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
LRRTM1Q86UE6 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRTM1Q86UE6 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRTM1Q86UE6 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.44■□□□□ 0.06
LRRTM1Q86UE6 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRTM1Q86UE6 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRTM1Q86UE6 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.44■□□□□ 0.06
LRRTM1Q86UE6 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRTM1Q86UE6 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRTM1Q86UE6 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LRRTM1Q86UE6 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LRRTM1Q86UE6 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.44■□□□□ 0.06
LRRTM1Q86UE6 SEC1P-202ENST00000473944 940 ntBASIC15.44■□□□□ 0.06
LRRTM1Q86UE6 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LRRTM1Q86UE6 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.44■□□□□ 0.06
LRRTM1Q86UE6 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC15.44■□□□□ 0.06
LRRTM1Q86UE6 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRTM1Q86UE6 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.44■□□□□ 0.06
LRRTM1Q86UE6 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
LRRTM1Q86UE6 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRTM1Q86UE6 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
LRRTM1Q86UE6 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRTM1Q86UE6 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRTM1Q86UE6 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRTM1Q86UE6 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LRRTM1Q86UE6 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.44■□□□□ 0.06
LRRTM1Q86UE6 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRTM1Q86UE6 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRTM1Q86UE6 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms