Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
LYSMD3Q7Z3D4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LYSMD3Q7Z3D4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LYSMD3Q7Z3D4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.88■□□□□ 0.45
LYSMD3Q7Z3D4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.88■□□□□ 0.45
LYSMD3Q7Z3D4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
LYSMD3Q7Z3D4 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LYSMD3Q7Z3D4 AC246785.2-201ENST00000432512 513 ntBASIC17.88■□□□□ 0.45
LYSMD3Q7Z3D4 AP000867.3-201ENST00000524675 377 ntBASIC17.88■□□□□ 0.45
LYSMD3Q7Z3D4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LYSMD3Q7Z3D4 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.88■□□□□ 0.45
LYSMD3Q7Z3D4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.88■□□□□ 0.45
LYSMD3Q7Z3D4 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.88■□□□□ 0.45
LYSMD3Q7Z3D4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.88■□□□□ 0.45
LYSMD3Q7Z3D4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LYSMD3Q7Z3D4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.88■□□□□ 0.45
LYSMD3Q7Z3D4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.88■□□□□ 0.45
LYSMD3Q7Z3D4 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.88■□□□□ 0.45
LYSMD3Q7Z3D4 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
LYSMD3Q7Z3D4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
LYSMD3Q7Z3D4 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LYSMD3Q7Z3D4 AC009949.1-201ENST00000623048 1830 ntBASIC17.88■□□□□ 0.45
LYSMD3Q7Z3D4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LYSMD3Q7Z3D4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LYSMD3Q7Z3D4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LYSMD3Q7Z3D4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.88■□□□□ 0.45
LYSMD3Q7Z3D4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LYSMD3Q7Z3D4 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LYSMD3Q7Z3D4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
LYSMD3Q7Z3D4 AC099398.1-201ENST00000567919 2776 ntBASIC17.87■□□□□ 0.45
LYSMD3Q7Z3D4 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LYSMD3Q7Z3D4 AC012317.2-201ENST00000623305 2251 ntBASIC17.87■□□□□ 0.45
LYSMD3Q7Z3D4 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.87■□□□□ 0.45
LYSMD3Q7Z3D4 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.87■□□□□ 0.45
LYSMD3Q7Z3D4 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LYSMD3Q7Z3D4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.87■□□□□ 0.45
LYSMD3Q7Z3D4 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
LYSMD3Q7Z3D4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LYSMD3Q7Z3D4 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
LYSMD3Q7Z3D4 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.87■□□□□ 0.45
LYSMD3Q7Z3D4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LYSMD3Q7Z3D4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.87■□□□□ 0.45
LYSMD3Q7Z3D4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.87■□□□□ 0.45
LYSMD3Q7Z3D4 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LYSMD3Q7Z3D4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
LYSMD3Q7Z3D4 Z69720.1-201ENST00000601483 472 ntBASIC17.87■□□□□ 0.45
LYSMD3Q7Z3D4 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.87■□□□□ 0.45
LYSMD3Q7Z3D4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LYSMD3Q7Z3D4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LYSMD3Q7Z3D4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
LYSMD3Q7Z3D4 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LYSMD3Q7Z3D4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LYSMD3Q7Z3D4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.87■□□□□ 0.45
LYSMD3Q7Z3D4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
LYSMD3Q7Z3D4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LYSMD3Q7Z3D4 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LYSMD3Q7Z3D4 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.87■□□□□ 0.45
LYSMD3Q7Z3D4 HTR7P1-202ENST00000624664 4411 ntBASIC17.87■□□□□ 0.45
LYSMD3Q7Z3D4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LYSMD3Q7Z3D4 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.87■□□□□ 0.45
LYSMD3Q7Z3D4 AC106820.2-201ENST00000563775 3264 ntBASIC17.87■□□□□ 0.45
LYSMD3Q7Z3D4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
LYSMD3Q7Z3D4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD3Q7Z3D4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD3Q7Z3D4 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LYSMD3Q7Z3D4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD3Q7Z3D4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD3Q7Z3D4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD3Q7Z3D4 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LYSMD3Q7Z3D4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
LYSMD3Q7Z3D4 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
LYSMD3Q7Z3D4 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
LYSMD3Q7Z3D4 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD3Q7Z3D4 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD3Q7Z3D4 SLC25A6P5-201ENST00000435663 894 ntBASIC17.86■□□□□ 0.45
LYSMD3Q7Z3D4 KRT17P6-201ENST00000453795 1220 ntBASIC17.86■□□□□ 0.45
LYSMD3Q7Z3D4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.86■□□□□ 0.45
LYSMD3Q7Z3D4 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.86■□□□□ 0.45
LYSMD3Q7Z3D4 AC074051.2-201ENST00000565115 352 ntBASIC17.86■□□□□ 0.45
LYSMD3Q7Z3D4 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.86■□□□□ 0.45
LYSMD3Q7Z3D4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.86■□□□□ 0.45
LYSMD3Q7Z3D4 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.86■□□□□ 0.45
LYSMD3Q7Z3D4 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
LYSMD3Q7Z3D4 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
LYSMD3Q7Z3D4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD3Q7Z3D4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD3Q7Z3D4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD3Q7Z3D4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD3Q7Z3D4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD3Q7Z3D4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
LYSMD3Q7Z3D4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
LYSMD3Q7Z3D4 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD3Q7Z3D4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD3Q7Z3D4 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
LYSMD3Q7Z3D4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD3Q7Z3D4 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.86■□□□□ 0.45
LYSMD3Q7Z3D4 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LYSMD3Q7Z3D4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD3Q7Z3D4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD3Q7Z3D4 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms