Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VPS13CQ709C8 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VPS13CQ709C8 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS13CQ709C8 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VPS13CQ709C8 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.72□□□□□ -0.05
VPS13CQ709C8 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS13CQ709C8 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS13CQ709C8 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS13CQ709C8 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS13CQ709C8 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
VPS13CQ709C8 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS13CQ709C8 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS13CQ709C8 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.71□□□□□ -0.05
VPS13CQ709C8 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.71□□□□□ -0.05
VPS13CQ709C8 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.71□□□□□ -0.05
VPS13CQ709C8 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.71□□□□□ -0.05
VPS13CQ709C8 DUX4L27-201ENST00000554796 1261 ntBASIC14.71□□□□□ -0.05
VPS13CQ709C8 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
VPS13CQ709C8 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
VPS13CQ709C8 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS13CQ709C8 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.71□□□□□ -0.05
VPS13CQ709C8 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VPS13CQ709C8 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.71□□□□□ -0.05
VPS13CQ709C8 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS13CQ709C8 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS13CQ709C8 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
VPS13CQ709C8 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.71□□□□□ -0.05
VPS13CQ709C8 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.71□□□□□ -0.05
VPS13CQ709C8 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.71□□□□□ -0.05
VPS13CQ709C8 AC004790.2-201ENST00000623588 572 ntBASIC14.71□□□□□ -0.05
VPS13CQ709C8 AC073592.5-201ENST00000624854 528 ntBASIC14.71□□□□□ -0.05
VPS13CQ709C8 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VPS13CQ709C8 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VPS13CQ709C8 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS13CQ709C8 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
VPS13CQ709C8 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.71□□□□□ -0.06
VPS13CQ709C8 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
VPS13CQ709C8 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
VPS13CQ709C8 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
VPS13CQ709C8 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
VPS13CQ709C8 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VPS13CQ709C8 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS13CQ709C8 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS13CQ709C8 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VPS13CQ709C8 AC009949.1-201ENST00000623048 1830 ntBASIC14.7□□□□□ -0.06
VPS13CQ709C8 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC14.7□□□□□ -0.06
VPS13CQ709C8 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
VPS13CQ709C8 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.7□□□□□ -0.06
VPS13CQ709C8 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.7□□□□□ -0.06
VPS13CQ709C8 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.7□□□□□ -0.06
VPS13CQ709C8 AL020989.1-201ENST00000422979 469 ntBASIC14.7□□□□□ -0.06
VPS13CQ709C8 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.7□□□□□ -0.06
VPS13CQ709C8 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.7□□□□□ -0.06
VPS13CQ709C8 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.7□□□□□ -0.06
VPS13CQ709C8 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
VPS13CQ709C8 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.7□□□□□ -0.06
VPS13CQ709C8 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
VPS13CQ709C8 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.7□□□□□ -0.06
VPS13CQ709C8 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
VPS13CQ709C8 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VPS13CQ709C8 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC14.7□□□□□ -0.06
VPS13CQ709C8 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC14.7□□□□□ -0.06
VPS13CQ709C8 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.7□□□□□ -0.06
VPS13CQ709C8 PODN-203ENST00000395871 2744 ntTSL 5 BASIC14.7□□□□□ -0.06
VPS13CQ709C8 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS13CQ709C8 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS13CQ709C8 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS13CQ709C8 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VPS13CQ709C8 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.7□□□□□ -0.06
VPS13CQ709C8 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VPS13CQ709C8 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.7□□□□□ -0.06
VPS13CQ709C8 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.7□□□□□ -0.06
VPS13CQ709C8 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS13CQ709C8 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VPS13CQ709C8 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VPS13CQ709C8 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VPS13CQ709C8 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS13CQ709C8 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VPS13CQ709C8 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.7□□□□□ -0.06
VPS13CQ709C8 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS13CQ709C8 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.7□□□□□ -0.06
VPS13CQ709C8 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS13CQ709C8 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.7□□□□□ -0.06
VPS13CQ709C8 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS13CQ709C8 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.69□□□□□ -0.06
VPS13CQ709C8 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS13CQ709C8 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.69□□□□□ -0.06
VPS13CQ709C8 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.69□□□□□ -0.06
VPS13CQ709C8 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VPS13CQ709C8 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.69□□□□□ -0.06
VPS13CQ709C8 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
VPS13CQ709C8 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS13CQ709C8 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.69□□□□□ -0.06
VPS13CQ709C8 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC14.69□□□□□ -0.06
VPS13CQ709C8 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VPS13CQ709C8 CRYGEP-201ENST00000412192 528 ntBASIC14.69□□□□□ -0.06
VPS13CQ709C8 ELK2BP-201ENST00000415014 1224 ntBASIC14.69□□□□□ -0.06
VPS13CQ709C8 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VPS13CQ709C8 AC008687.5-201ENST00000593746 558 ntBASIC14.69□□□□□ -0.06
VPS13CQ709C8 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms