Protein–RNA interactions for Protein: Q6PJG6

BRAT1, BRCA1-associated ATM activator 1, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1Q6PJG6 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 AL390961.4-201ENST00000623958 2535 ntBASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BRAT1Q6PJG6 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
BRAT1Q6PJG6 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
BRAT1Q6PJG6 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.79■□□□□ 0.44
BRAT1Q6PJG6 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.79■□□□□ 0.44
BRAT1Q6PJG6 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
BRAT1Q6PJG6 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BRAT1Q6PJG6 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
BRAT1Q6PJG6 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BRAT1Q6PJG6 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
BRAT1Q6PJG6 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BRAT1Q6PJG6 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
BRAT1Q6PJG6 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
BRAT1Q6PJG6 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.79■□□□□ 0.44
BRAT1Q6PJG6 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.79■□□□□ 0.44
BRAT1Q6PJG6 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.79■□□□□ 0.44
BRAT1Q6PJG6 AL121894.2-201ENST00000602977 491 ntBASIC17.79■□□□□ 0.44
BRAT1Q6PJG6 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.79■□□□□ 0.44
BRAT1Q6PJG6 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BRAT1Q6PJG6 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
BRAT1Q6PJG6 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.79■□□□□ 0.44
BRAT1Q6PJG6 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BRAT1Q6PJG6 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.79■□□□□ 0.44
BRAT1Q6PJG6 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BRAT1Q6PJG6 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BRAT1Q6PJG6 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
BRAT1Q6PJG6 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
BRAT1Q6PJG6 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BRAT1Q6PJG6 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.78■□□□□ 0.44
BRAT1Q6PJG6 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
BRAT1Q6PJG6 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BRAT1Q6PJG6 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
BRAT1Q6PJG6 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.78■□□□□ 0.44
BRAT1Q6PJG6 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BRAT1Q6PJG6 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
BRAT1Q6PJG6 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BRAT1Q6PJG6 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BRAT1Q6PJG6 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
BRAT1Q6PJG6 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.78■□□□□ 0.44
BRAT1Q6PJG6 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BRAT1Q6PJG6 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BRAT1Q6PJG6 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.78■□□□□ 0.44
BRAT1Q6PJG6 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.78■□□□□ 0.44
BRAT1Q6PJG6 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
BRAT1Q6PJG6 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.78■□□□□ 0.44
BRAT1Q6PJG6 AL121912.1-201ENST00000603683 238 ntBASIC17.78■□□□□ 0.44
BRAT1Q6PJG6 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
BRAT1Q6PJG6 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
BRAT1Q6PJG6 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BRAT1Q6PJG6 AC138932.1-201ENST00000534164 6830 ntBASIC17.78■□□□□ 0.44
BRAT1Q6PJG6 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.78■□□□□ 0.44
BRAT1Q6PJG6 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BRAT1Q6PJG6 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BRAT1Q6PJG6 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.78■□□□□ 0.44
BRAT1Q6PJG6 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BRAT1Q6PJG6 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.78■□□□□ 0.44
BRAT1Q6PJG6 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BRAT1Q6PJG6 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
BRAT1Q6PJG6 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
BRAT1Q6PJG6 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
BRAT1Q6PJG6 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BRAT1Q6PJG6 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BRAT1Q6PJG6 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BRAT1Q6PJG6 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.77■□□□□ 0.44
BRAT1Q6PJG6 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
BRAT1Q6PJG6 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
BRAT1Q6PJG6 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BRAT1Q6PJG6 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BRAT1Q6PJG6 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BRAT1Q6PJG6 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.77■□□□□ 0.44
BRAT1Q6PJG6 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.77■□□□□ 0.44
BRAT1Q6PJG6 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms