Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF43Q68DV7 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RNF43Q68DV7 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
RNF43Q68DV7 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.66■□□□□ 0.58
RNF43Q68DV7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RNF43Q68DV7 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF43Q68DV7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RNF43Q68DV7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF43Q68DV7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF43Q68DV7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF43Q68DV7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF43Q68DV7 AC233702.3-201ENST00000578656 1387 ntBASIC18.66■□□□□ 0.58
RNF43Q68DV7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF43Q68DV7 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF43Q68DV7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RNF43Q68DV7 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF43Q68DV7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF43Q68DV7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF43Q68DV7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF43Q68DV7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF43Q68DV7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF43Q68DV7 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF43Q68DV7 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF43Q68DV7 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF43Q68DV7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF43Q68DV7 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF43Q68DV7 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF43Q68DV7 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF43Q68DV7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF43Q68DV7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF43Q68DV7 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF43Q68DV7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF43Q68DV7 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.65■□□□□ 0.58
RNF43Q68DV7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF43Q68DV7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.65■□□□□ 0.58
RNF43Q68DV7 TOB2P1-201ENST00000469761 992 ntBASIC18.65■□□□□ 0.58
RNF43Q68DV7 GUSBP12-201ENST00000513727 720 ntBASIC18.65■□□□□ 0.58
RNF43Q68DV7 AP000867.3-201ENST00000524675 377 ntBASIC18.65■□□□□ 0.58
RNF43Q68DV7 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF43Q68DV7 AC012615.1-201ENST00000565797 1299 ntBASIC18.65■□□□□ 0.58
RNF43Q68DV7 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RNF43Q68DV7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF43Q68DV7 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF43Q68DV7 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF43Q68DV7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF43Q68DV7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF43Q68DV7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF43Q68DV7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF43Q68DV7 LINC00167-201ENST00000530583 1419 ntBASIC18.65■□□□□ 0.58
RNF43Q68DV7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF43Q68DV7 AC012317.2-201ENST00000623305 2251 ntBASIC18.65■□□□□ 0.58
RNF43Q68DV7 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
RNF43Q68DV7 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
RNF43Q68DV7 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RNF43Q68DV7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
RNF43Q68DV7 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RNF43Q68DV7 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
RNF43Q68DV7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RNF43Q68DV7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF43Q68DV7 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF43Q68DV7 AC090340.1-201ENST00000620778 4980 ntBASIC18.64■□□□□ 0.57
RNF43Q68DV7 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF43Q68DV7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF43Q68DV7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF43Q68DV7 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF43Q68DV7 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
RNF43Q68DV7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF43Q68DV7 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.64■□□□□ 0.57
RNF43Q68DV7 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF43Q68DV7 IGHV3-47-201ENST00000425060 335 ntBASIC18.64■□□□□ 0.57
RNF43Q68DV7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
RNF43Q68DV7 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF43Q68DV7 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF43Q68DV7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
RNF43Q68DV7 IGHV3-41-201ENST00000613121 348 ntBASIC18.64■□□□□ 0.57
RNF43Q68DV7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF43Q68DV7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF43Q68DV7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF43Q68DV7 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF43Q68DV7 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RNF43Q68DV7 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF43Q68DV7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF43Q68DV7 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF43Q68DV7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
RNF43Q68DV7 PCDHA12-202ENST00000613593 2588 ntBASIC18.64■□□□□ 0.57
RNF43Q68DV7 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.64■□□□□ 0.57
RNF43Q68DV7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF43Q68DV7 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RNF43Q68DV7 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF43Q68DV7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.63■□□□□ 0.57
RNF43Q68DV7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF43Q68DV7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
RNF43Q68DV7 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF43Q68DV7 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF43Q68DV7 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF43Q68DV7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
RNF43Q68DV7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF43Q68DV7 LINC00265-3P-201ENST00000447588 903 ntBASIC18.63■□□□□ 0.57
RNF43Q68DV7 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF43Q68DV7 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms