Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
CTSL3PQ5NE16 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CTSL3PQ5NE16 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CTSL3PQ5NE16 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CTSL3PQ5NE16 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.52■□□□□ 0.39
CTSL3PQ5NE16 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CTSL3PQ5NE16 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTSL3PQ5NE16 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTSL3PQ5NE16 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTSL3PQ5NE16 AC097374.2-201ENST00000618617 1306 ntBASIC17.51■□□□□ 0.39
CTSL3PQ5NE16 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTSL3PQ5NE16 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTSL3PQ5NE16 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTSL3PQ5NE16 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTSL3PQ5NE16 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTSL3PQ5NE16 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTSL3PQ5NE16 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CTSL3PQ5NE16 AC125634.1-201ENST00000438758 1403 ntBASIC17.51■□□□□ 0.39
CTSL3PQ5NE16 AP002383.4-201ENST00000442518 975 ntBASIC17.51■□□□□ 0.39
CTSL3PQ5NE16 TSSC2-201ENST00000450217 709 ntBASIC17.51■□□□□ 0.39
CTSL3PQ5NE16 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTSL3PQ5NE16 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.51■□□□□ 0.39
CTSL3PQ5NE16 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.51■□□□□ 0.39
CTSL3PQ5NE16 AP005901.3-202ENST00000581653 237 ntBASIC17.51■□□□□ 0.39
CTSL3PQ5NE16 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.51■□□□□ 0.39
CTSL3PQ5NE16 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CTSL3PQ5NE16 AL358472.4-201ENST00000633140 710 ntBASIC17.51■□□□□ 0.39
CTSL3PQ5NE16 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTSL3PQ5NE16 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTSL3PQ5NE16 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTSL3PQ5NE16 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTSL3PQ5NE16 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTSL3PQ5NE16 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.51■□□□□ 0.39
CTSL3PQ5NE16 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.51■□□□□ 0.39
CTSL3PQ5NE16 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTSL3PQ5NE16 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
CTSL3PQ5NE16 AC141586.5-201ENST00000624546 2050 ntBASIC17.51■□□□□ 0.39
CTSL3PQ5NE16 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTSL3PQ5NE16 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.51■□□□□ 0.39
CTSL3PQ5NE16 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.51■□□□□ 0.39
CTSL3PQ5NE16 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 FZD10-202ENST00000539839 3282 ntBASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 MIR1224-201ENST00000408193 85 ntBASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 AC005104.2-201ENST00000427818 678 ntBASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 AC007967.3-201ENST00000434308 558 ntBASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 AC011840.4-201ENST00000578471 627 ntBASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 AL138831.2-201ENST00000606564 490 ntBASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 AP000550.4-202ENST00000639755 178 ntBASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 AL645608.8-201ENST00000606034 2086 ntBASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSL3PQ5NE16 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CTSL3PQ5NE16 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CTSL3PQ5NE16 AL138688.1-201ENST00000624851 1594 ntBASIC17.49■□□□□ 0.39
CTSL3PQ5NE16 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTSL3PQ5NE16 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CTSL3PQ5NE16 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTSL3PQ5NE16 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.49■□□□□ 0.39
CTSL3PQ5NE16 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTSL3PQ5NE16 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTSL3PQ5NE16 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTSL3PQ5NE16 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTSL3PQ5NE16 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.49■□□□□ 0.39
CTSL3PQ5NE16 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.49■□□□□ 0.39
CTSL3PQ5NE16 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.49■□□□□ 0.39
CTSL3PQ5NE16 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms