Protein–RNA interactions for Protein: Q59H18

TNNI3K, Serine/threonine-protein kinase TNNI3K, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI3KQ59H18 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TNNI3KQ59H18 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TNNI3KQ59H18 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TNNI3KQ59H18 AC103564.2-201ENST00000432853 1299 ntBASIC21.68■■□□□ 1.06
TNNI3KQ59H18 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC21.68■■□□□ 1.06
TNNI3KQ59H18 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC21.68■■□□□ 1.06
TNNI3KQ59H18 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC21.68■■□□□ 1.06
TNNI3KQ59H18 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
TNNI3KQ59H18 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TNNI3KQ59H18 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TNNI3KQ59H18 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TNNI3KQ59H18 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TNNI3KQ59H18 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TNNI3KQ59H18 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TNNI3KQ59H18 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
TNNI3KQ59H18 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNNI3KQ59H18 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNNI3KQ59H18 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
TNNI3KQ59H18 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC21.67■■□□□ 1.06
TNNI3KQ59H18 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNNI3KQ59H18 PMPCAP1-201ENST00000508114 1576 ntBASIC21.67■■□□□ 1.06
TNNI3KQ59H18 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TNNI3KQ59H18 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNNI3KQ59H18 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC21.67■■□□□ 1.06
TNNI3KQ59H18 KRT8P10-201ENST00000450021 1447 ntBASIC21.67■■□□□ 1.06
TNNI3KQ59H18 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNNI3KQ59H18 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC21.67■■□□□ 1.06
TNNI3KQ59H18 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNNI3KQ59H18 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC21.67■■□□□ 1.06
TNNI3KQ59H18 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC21.67■■□□□ 1.06
TNNI3KQ59H18 RBM17P3-201ENST00000417687 1192 ntBASIC21.67■■□□□ 1.06
TNNI3KQ59H18 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNNI3KQ59H18 FGFR3P6-201ENST00000457012 610 ntBASIC21.67■■□□□ 1.06
TNNI3KQ59H18 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TNNI3KQ59H18 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC21.67■■□□□ 1.06
TNNI3KQ59H18 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
TNNI3KQ59H18 AL121912.1-201ENST00000603683 238 ntBASIC21.67■■□□□ 1.06
TNNI3KQ59H18 AC008608.2-201ENST00000606089 416 ntBASIC21.67■■□□□ 1.06
TNNI3KQ59H18 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC21.67■■□□□ 1.06
TNNI3KQ59H18 AL355877.3-201ENST00000622820 899 ntBASIC21.67■■□□□ 1.06
TNNI3KQ59H18 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC21.67■■□□□ 1.06
TNNI3KQ59H18 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.67■■□□□ 1.06
TNNI3KQ59H18 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNNI3KQ59H18 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TNNI3KQ59H18 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TNNI3KQ59H18 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNNI3KQ59H18 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TNNI3KQ59H18 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
TNNI3KQ59H18 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNNI3KQ59H18 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNNI3KQ59H18 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TNNI3KQ59H18 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC21.66■■□□□ 1.06
TNNI3KQ59H18 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
TNNI3KQ59H18 AL353593.2-201ENST00000602529 1483 ntBASIC21.66■■□□□ 1.06
TNNI3KQ59H18 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TNNI3KQ59H18 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNNI3KQ59H18 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TNNI3KQ59H18 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNNI3KQ59H18 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNNI3KQ59H18 SOD2-201ENST00000337404 991 ntTSL 2 BASIC21.66■■□□□ 1.06
TNNI3KQ59H18 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
TNNI3KQ59H18 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC21.66■■□□□ 1.06
TNNI3KQ59H18 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.66■■□□□ 1.06
TNNI3KQ59H18 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC21.66■■□□□ 1.06
TNNI3KQ59H18 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC21.66■■□□□ 1.06
TNNI3KQ59H18 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC21.66■■□□□ 1.06
TNNI3KQ59H18 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TNNI3KQ59H18 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNNI3KQ59H18 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC21.66■■□□□ 1.06
TNNI3KQ59H18 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNNI3KQ59H18 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNNI3KQ59H18 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.66■■□□□ 1.06
TNNI3KQ59H18 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC21.66■■□□□ 1.06
TNNI3KQ59H18 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC21.66■■□□□ 1.06
TNNI3KQ59H18 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
TNNI3KQ59H18 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TNNI3KQ59H18 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TNNI3KQ59H18 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
TNNI3KQ59H18 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC21.65■■□□□ 1.06
TNNI3KQ59H18 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.65■■□□□ 1.06
TNNI3KQ59H18 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TNNI3KQ59H18 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
TNNI3KQ59H18 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TNNI3KQ59H18 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC21.65■■□□□ 1.06
TNNI3KQ59H18 AC005104.2-201ENST00000427818 678 ntBASIC21.65■■□□□ 1.06
TNNI3KQ59H18 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TNNI3KQ59H18 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TNNI3KQ59H18 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC21.65■■□□□ 1.06
TNNI3KQ59H18 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC21.65■■□□□ 1.06
TNNI3KQ59H18 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC21.65■■□□□ 1.06
TNNI3KQ59H18 MTDHP3-201ENST00000594186 672 ntBASIC21.65■■□□□ 1.06
TNNI3KQ59H18 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
TNNI3KQ59H18 TP73-AS1-207ENST00000624167 988 ntBASIC21.65■■□□□ 1.06
TNNI3KQ59H18 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC21.65■■□□□ 1.06
TNNI3KQ59H18 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TNNI3KQ59H18 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
TNNI3KQ59H18 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
TNNI3KQ59H18 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TNNI3KQ59H18 GATB-213ENST00000515812 1893 ntTSL 5 BASIC21.64■■□□□ 1.06
TNNI3KQ59H18 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms