Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
RUNDC3AQ59EK9 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RUNDC3AQ59EK9 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
RUNDC3AQ59EK9 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.82■□□□□ 0.28
RUNDC3AQ59EK9 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.82■□□□□ 0.28
RUNDC3AQ59EK9 AC128688.1-201ENST00000487626 519 ntBASIC16.82■□□□□ 0.28
RUNDC3AQ59EK9 NEK4P2-201ENST00000580004 1012 ntBASIC16.82■□□□□ 0.28
RUNDC3AQ59EK9 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.82■□□□□ 0.28
RUNDC3AQ59EK9 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.82■□□□□ 0.28
RUNDC3AQ59EK9 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.82■□□□□ 0.28
RUNDC3AQ59EK9 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.82■□□□□ 0.28
RUNDC3AQ59EK9 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RUNDC3AQ59EK9 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RUNDC3AQ59EK9 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RUNDC3AQ59EK9 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.82■□□□□ 0.28
RUNDC3AQ59EK9 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RUNDC3AQ59EK9 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RUNDC3AQ59EK9 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RUNDC3AQ59EK9 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RUNDC3AQ59EK9 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RUNDC3AQ59EK9 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RUNDC3AQ59EK9 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RUNDC3AQ59EK9 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RUNDC3AQ59EK9 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RUNDC3AQ59EK9 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.81■□□□□ 0.28
RUNDC3AQ59EK9 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RUNDC3AQ59EK9 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RUNDC3AQ59EK9 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
RUNDC3AQ59EK9 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RUNDC3AQ59EK9 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RUNDC3AQ59EK9 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RUNDC3AQ59EK9 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.81■□□□□ 0.28
RUNDC3AQ59EK9 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.81■□□□□ 0.28
RUNDC3AQ59EK9 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RUNDC3AQ59EK9 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RUNDC3AQ59EK9 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RUNDC3AQ59EK9 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RUNDC3AQ59EK9 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.81■□□□□ 0.28
RUNDC3AQ59EK9 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RUNDC3AQ59EK9 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.81■□□□□ 0.28
RUNDC3AQ59EK9 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.81■□□□□ 0.28
RUNDC3AQ59EK9 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.81■□□□□ 0.28
RUNDC3AQ59EK9 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.81■□□□□ 0.28
RUNDC3AQ59EK9 AC008550.1-201ENST00000511500 884 ntBASIC16.81■□□□□ 0.28
RUNDC3AQ59EK9 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
RUNDC3AQ59EK9 AL157888.1-201ENST00000631930 593 ntBASIC16.81■□□□□ 0.28
RUNDC3AQ59EK9 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RUNDC3AQ59EK9 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.81■□□□□ 0.28
RUNDC3AQ59EK9 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RUNDC3AQ59EK9 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.81■□□□□ 0.28
RUNDC3AQ59EK9 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RUNDC3AQ59EK9 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RUNDC3AQ59EK9 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.81■□□□□ 0.28
RUNDC3AQ59EK9 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RUNDC3AQ59EK9 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RUNDC3AQ59EK9 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
RUNDC3AQ59EK9 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.81■□□□□ 0.28
RUNDC3AQ59EK9 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RUNDC3AQ59EK9 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
RUNDC3AQ59EK9 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RUNDC3AQ59EK9 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RUNDC3AQ59EK9 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RUNDC3AQ59EK9 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.8■□□□□ 0.28
RUNDC3AQ59EK9 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RUNDC3AQ59EK9 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RUNDC3AQ59EK9 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RUNDC3AQ59EK9 KRT8P47-201ENST00000604727 1398 ntBASIC16.8■□□□□ 0.28
RUNDC3AQ59EK9 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RUNDC3AQ59EK9 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RUNDC3AQ59EK9 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RUNDC3AQ59EK9 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RUNDC3AQ59EK9 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RUNDC3AQ59EK9 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RUNDC3AQ59EK9 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.8■□□□□ 0.28
RUNDC3AQ59EK9 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RUNDC3AQ59EK9 MIR718-201ENST00000390190 70 ntBASIC16.8■□□□□ 0.28
RUNDC3AQ59EK9 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.8■□□□□ 0.28
RUNDC3AQ59EK9 KRT18P65-201ENST00000439811 1286 ntBASIC16.8■□□□□ 0.28
RUNDC3AQ59EK9 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.8■□□□□ 0.28
RUNDC3AQ59EK9 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RUNDC3AQ59EK9 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.8■□□□□ 0.28
RUNDC3AQ59EK9 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.8■□□□□ 0.28
RUNDC3AQ59EK9 AL355075.4-201ENST00000554988 638 ntBASIC16.8■□□□□ 0.28
RUNDC3AQ59EK9 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.8■□□□□ 0.28
RUNDC3AQ59EK9 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.8■□□□□ 0.28
RUNDC3AQ59EK9 AL512604.3-201ENST00000569583 964 ntBASIC16.8■□□□□ 0.28
RUNDC3AQ59EK9 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.8■□□□□ 0.28
RUNDC3AQ59EK9 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RUNDC3AQ59EK9 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
RUNDC3AQ59EK9 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RUNDC3AQ59EK9 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RUNDC3AQ59EK9 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RUNDC3AQ59EK9 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
RUNDC3AQ59EK9 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.8■□□□□ 0.28
RUNDC3AQ59EK9 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RUNDC3AQ59EK9 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
RUNDC3AQ59EK9 CYP2D8P-201ENST00000433633 1490 ntBASIC16.8■□□□□ 0.28
RUNDC3AQ59EK9 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.8■□□□□ 0.28
RUNDC3AQ59EK9 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RUNDC3AQ59EK9 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms