Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 FLJ16779-201ENST00000612722 7638 ntBASIC11.79□□□□□ -0.52
SYCNQ0VAF6 TERF1P1-201ENST00000311003 1181 ntBASIC11.79□□□□□ -0.52
SYCNQ0VAF6 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 STARP1-201ENST00000397973 869 ntBASIC11.79□□□□□ -0.52
SYCNQ0VAF6 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 AL441883.1-201ENST00000566170 1045 ntBASIC11.79□□□□□ -0.52
SYCNQ0VAF6 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 AC011558.1-201ENST00000623459 338 ntBASIC11.79□□□□□ -0.52
SYCNQ0VAF6 AC097493.4-201ENST00000641197 219 ntBASIC11.79□□□□□ -0.52
SYCNQ0VAF6 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 AL391807.1-203ENST00000604392 2365 ntBASIC11.79□□□□□ -0.52
SYCNQ0VAF6 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 AC012317.2-201ENST00000623305 2251 ntBASIC11.79□□□□□ -0.52
SYCNQ0VAF6 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SYCNQ0VAF6 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 YBX1P2-201ENST00000489612 999 ntBASIC11.78□□□□□ -0.52
SYCNQ0VAF6 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 LINC01023-201ENST00000606054 436 ntBASIC11.78□□□□□ -0.52
SYCNQ0VAF6 AC139887.4-201ENST00000607877 719 ntBASIC11.78□□□□□ -0.52
SYCNQ0VAF6 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms