Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDH1Q08174 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH1Q08174 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDH1Q08174 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH1Q08174 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH1Q08174 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH1Q08174 AL121956.5-201ENST00000625261 221 ntBASIC17.17■□□□□ 0.34
PCDH1Q08174 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH1Q08174 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH1Q08174 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PCDH1Q08174 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDH1Q08174 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PCDH1Q08174 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH1Q08174 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDH1Q08174 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH1Q08174 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH1Q08174 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PCDH1Q08174 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDH1Q08174 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH1Q08174 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
PCDH1Q08174 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDH1Q08174 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH1Q08174 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH1Q08174 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH1Q08174 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH1Q08174 AL031133.1-201ENST00000406807 723 ntBASIC17.16■□□□□ 0.34
PCDH1Q08174 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDH1Q08174 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDH1Q08174 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.16■□□□□ 0.34
PCDH1Q08174 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH1Q08174 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDH1Q08174 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH1Q08174 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH1Q08174 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH1Q08174 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH1Q08174 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH1Q08174 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH1Q08174 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH1Q08174 BX276092.7-203ENST00000637198 1536 ntBASIC17.16■□□□□ 0.34
PCDH1Q08174 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDH1Q08174 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH1Q08174 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDH1Q08174 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH1Q08174 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDH1Q08174 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH1Q08174 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH1Q08174 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH1Q08174 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDH1Q08174 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDH1Q08174 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH1Q08174 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
PCDH1Q08174 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH1Q08174 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH1Q08174 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDH1Q08174 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.15■□□□□ 0.34
PCDH1Q08174 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.15■□□□□ 0.34
PCDH1Q08174 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PCDH1Q08174 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH1Q08174 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDH1Q08174 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.15■□□□□ 0.34
PCDH1Q08174 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.15■□□□□ 0.34
PCDH1Q08174 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDH1Q08174 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDH1Q08174 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PCDH1Q08174 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH1Q08174 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PCDH1Q08174 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH1Q08174 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH1Q08174 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH1Q08174 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.15■□□□□ 0.34
PCDH1Q08174 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH1Q08174 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH1Q08174 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDH1Q08174 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PCDH1Q08174 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PCDH1Q08174 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH1Q08174 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH1Q08174 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH1Q08174 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH1Q08174 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH1Q08174 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
PCDH1Q08174 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
PCDH1Q08174 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH1Q08174 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH1Q08174 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH1Q08174 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH1Q08174 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH1Q08174 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH1Q08174 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDH1Q08174 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PCDH1Q08174 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDH1Q08174 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH1Q08174 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH1Q08174 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH1Q08174 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH1Q08174 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDH1Q08174 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDH1Q08174 AC011498.5-201ENST00000592027 486 ntBASIC17.14■□□□□ 0.33
PCDH1Q08174 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PCDH1Q08174 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms