Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.22■□□□□ 0.19
CXCR4P61073 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CXCR4P61073 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CXCR4P61073 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CXCR4P61073 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CXCR4P61073 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.22■□□□□ 0.19
CXCR4P61073 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.22■□□□□ 0.19
CXCR4P61073 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CXCR4P61073 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.22■□□□□ 0.19
CXCR4P61073 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CXCR4P61073 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.22■□□□□ 0.19
CXCR4P61073 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CXCR4P61073 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CXCR4P61073 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CXCR4P61073 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CXCR4P61073 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CXCR4P61073 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.22■□□□□ 0.19
CXCR4P61073 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.22■□□□□ 0.19
CXCR4P61073 MIR4651-201ENST00000582622 73 ntBASIC16.22■□□□□ 0.19
CXCR4P61073 MIR3180-5-201ENST00000583743 153 ntBASIC16.22■□□□□ 0.19
CXCR4P61073 CD177P1-201ENST00000606252 935 ntBASIC16.22■□□□□ 0.19
CXCR4P61073 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CXCR4P61073 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.22■□□□□ 0.19
CXCR4P61073 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
CXCR4P61073 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CXCR4P61073 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.22■□□□□ 0.19
CXCR4P61073 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CXCR4P61073 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.22■□□□□ 0.19
CXCR4P61073 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CXCR4P61073 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CXCR4P61073 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CXCR4P61073 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.22■□□□□ 0.19
CXCR4P61073 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CXCR4P61073 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CXCR4P61073 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.22■□□□□ 0.19
CXCR4P61073 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CXCR4P61073 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CXCR4P61073 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CXCR4P61073 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CXCR4P61073 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CXCR4P61073 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CXCR4P61073 AC132938.6-201ENST00000623828 1655 ntBASIC16.21■□□□□ 0.19
CXCR4P61073 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CXCR4P61073 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CXCR4P61073 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CXCR4P61073 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CXCR4P61073 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
CXCR4P61073 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CXCR4P61073 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CXCR4P61073 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CXCR4P61073 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.21■□□□□ 0.19
CXCR4P61073 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.21■□□□□ 0.19
CXCR4P61073 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CXCR4P61073 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CXCR4P61073 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CXCR4P61073 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CXCR4P61073 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CXCR4P61073 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CXCR4P61073 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CXCR4P61073 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CXCR4P61073 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.21■□□□□ 0.19
CXCR4P61073 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.21■□□□□ 0.19
CXCR4P61073 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.21■□□□□ 0.19
CXCR4P61073 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CXCR4P61073 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.21■□□□□ 0.19
CXCR4P61073 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.21■□□□□ 0.19
CXCR4P61073 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.21■□□□□ 0.19
CXCR4P61073 CD99P1-205ENST00000527459 561 ntBASIC16.21■□□□□ 0.19
CXCR4P61073 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.21■□□□□ 0.19
CXCR4P61073 AC009065.1-201ENST00000564055 1225 ntBASIC16.21■□□□□ 0.19
CXCR4P61073 DGCR10-201ENST00000609839 495 ntBASIC16.21■□□□□ 0.19
CXCR4P61073 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CXCR4P61073 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CXCR4P61073 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CXCR4P61073 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.21■□□□□ 0.19
CXCR4P61073 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
CXCR4P61073 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CXCR4P61073 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CXCR4P61073 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.21■□□□□ 0.19
CXCR4P61073 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CXCR4P61073 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CXCR4P61073 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CXCR4P61073 REXO1L11P-201ENST00000620964 1927 ntBASIC16.21■□□□□ 0.19
CXCR4P61073 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CXCR4P61073 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
CXCR4P61073 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
CXCR4P61073 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CXCR4P61073 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
CXCR4P61073 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.21■□□□□ 0.18
CXCR4P61073 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CXCR4P61073 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
CXCR4P61073 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CXCR4P61073 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CXCR4P61073 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
CXCR4P61073 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CXCR4P61073 AL135905.2-201ENST00000584934 1404 ntBASIC16.2■□□□□ 0.18
CXCR4P61073 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.2■□□□□ 0.18
CXCR4P61073 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CXCR4P61073 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CXCR4P61073 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms