Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
WNT3AP56704 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
WNT3AP56704 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
WNT3AP56704 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
WNT3AP56704 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.98■□□□□ 0.47
WNT3AP56704 REXO1L11P-201ENST00000620964 1927 ntBASIC17.98■□□□□ 0.47
WNT3AP56704 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
WNT3AP56704 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
WNT3AP56704 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
WNT3AP56704 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
WNT3AP56704 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
WNT3AP56704 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
WNT3AP56704 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
WNT3AP56704 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
WNT3AP56704 AC096633.1-201ENST00000422446 749 ntBASIC17.98■□□□□ 0.47
WNT3AP56704 TSSC2-201ENST00000450217 709 ntBASIC17.98■□□□□ 0.47
WNT3AP56704 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
WNT3AP56704 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
WNT3AP56704 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.98■□□□□ 0.47
WNT3AP56704 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
WNT3AP56704 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
WNT3AP56704 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
WNT3AP56704 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
WNT3AP56704 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
WNT3AP56704 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
WNT3AP56704 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
WNT3AP56704 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
WNT3AP56704 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.98■□□□□ 0.47
WNT3AP56704 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.98■□□□□ 0.47
WNT3AP56704 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
WNT3AP56704 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
WNT3AP56704 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
WNT3AP56704 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
WNT3AP56704 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
WNT3AP56704 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
WNT3AP56704 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
WNT3AP56704 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
WNT3AP56704 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
WNT3AP56704 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.97■□□□□ 0.47
WNT3AP56704 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
WNT3AP56704 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
WNT3AP56704 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.97■□□□□ 0.47
WNT3AP56704 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
WNT3AP56704 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.97■□□□□ 0.47
WNT3AP56704 AC011840.4-201ENST00000578471 627 ntBASIC17.97■□□□□ 0.47
WNT3AP56704 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
WNT3AP56704 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
WNT3AP56704 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.97■□□□□ 0.47
WNT3AP56704 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
WNT3AP56704 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
WNT3AP56704 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
WNT3AP56704 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
WNT3AP56704 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
WNT3AP56704 LINC00304-203ENST00000565008 1864 ntBASIC17.97■□□□□ 0.47
WNT3AP56704 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
WNT3AP56704 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
WNT3AP56704 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.96■□□□□ 0.47
WNT3AP56704 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
WNT3AP56704 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.96■□□□□ 0.47
WNT3AP56704 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.96■□□□□ 0.47
WNT3AP56704 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
WNT3AP56704 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
WNT3AP56704 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
WNT3AP56704 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
WNT3AP56704 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.96■□□□□ 0.47
WNT3AP56704 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.96■□□□□ 0.47
WNT3AP56704 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.96■□□□□ 0.47
WNT3AP56704 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.96■□□□□ 0.47
WNT3AP56704 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
WNT3AP56704 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
WNT3AP56704 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
WNT3AP56704 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
WNT3AP56704 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.96■□□□□ 0.47
WNT3AP56704 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
WNT3AP56704 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.96■□□□□ 0.47
WNT3AP56704 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
WNT3AP56704 AC133963.1-201ENST00000504166 1679 ntBASIC17.96■□□□□ 0.47
WNT3AP56704 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.96■□□□□ 0.47
WNT3AP56704 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
WNT3AP56704 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
WNT3AP56704 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.96■□□□□ 0.47
WNT3AP56704 AC097374.2-201ENST00000618617 1306 ntBASIC17.96■□□□□ 0.46
WNT3AP56704 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
WNT3AP56704 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
WNT3AP56704 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
WNT3AP56704 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
WNT3AP56704 FZD10-202ENST00000539839 3282 ntBASIC17.96■□□□□ 0.46
WNT3AP56704 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.95■□□□□ 0.46
WNT3AP56704 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
WNT3AP56704 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
WNT3AP56704 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
WNT3AP56704 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
WNT3AP56704 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
WNT3AP56704 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
WNT3AP56704 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.95■□□□□ 0.46
WNT3AP56704 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
WNT3AP56704 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
WNT3AP56704 BX276092.7-203ENST00000637198 1536 ntBASIC17.95■□□□□ 0.46
WNT3AP56704 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
WNT3AP56704 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms