Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.42■□□□□ 0.38
CDH13P55290 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.42■□□□□ 0.38
CDH13P55290 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.42■□□□□ 0.38
CDH13P55290 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.42■□□□□ 0.38
CDH13P55290 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CDH13P55290 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH13P55290 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH13P55290 AC140113.3-201ENST00000605663 199 ntBASIC17.42■□□□□ 0.38
CDH13P55290 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH13P55290 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.42■□□□□ 0.38
CDH13P55290 REXO1L11P-201ENST00000620964 1927 ntBASIC17.42■□□□□ 0.38
CDH13P55290 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
CDH13P55290 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH13P55290 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH13P55290 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH13P55290 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CDH13P55290 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH13P55290 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH13P55290 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
CDH13P55290 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH13P55290 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH13P55290 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH13P55290 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH13P55290 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH13P55290 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH13P55290 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH13P55290 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH13P55290 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CDH13P55290 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH13P55290 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH13P55290 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
CDH13P55290 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH13P55290 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH13P55290 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH13P55290 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH13P55290 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH13P55290 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH13P55290 SLC25A3P1-201ENST00000443844 931 ntBASIC17.41■□□□□ 0.38
CDH13P55290 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH13P55290 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.41■□□□□ 0.38
CDH13P55290 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH13P55290 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CDH13P55290 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.41■□□□□ 0.38
CDH13P55290 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH13P55290 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH13P55290 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH13P55290 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH13P55290 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH13P55290 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH13P55290 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH13P55290 AL138688.1-201ENST00000624851 1594 ntBASIC17.4■□□□□ 0.38
CDH13P55290 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH13P55290 AL391807.1-203ENST00000604392 2365 ntBASIC17.4■□□□□ 0.38
CDH13P55290 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH13P55290 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH13P55290 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH13P55290 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH13P55290 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.4■□□□□ 0.38
CDH13P55290 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.4■□□□□ 0.38
CDH13P55290 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH13P55290 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH13P55290 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH13P55290 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CDH13P55290 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH13P55290 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH13P55290 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH13P55290 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH13P55290 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.4■□□□□ 0.38
CDH13P55290 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CDH13P55290 AL441883.1-201ENST00000566170 1045 ntBASIC17.4■□□□□ 0.38
CDH13P55290 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CDH13P55290 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.4■□□□□ 0.38
CDH13P55290 AC066615.1-201ENST00000640911 628 ntBASIC17.4■□□□□ 0.38
CDH13P55290 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.4■□□□□ 0.38
CDH13P55290 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH13P55290 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH13P55290 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH13P55290 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CDH13P55290 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.4■□□□□ 0.38
CDH13P55290 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH13P55290 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH13P55290 KRT8P47-201ENST00000604727 1398 ntBASIC17.4■□□□□ 0.38
CDH13P55290 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH13P55290 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH13P55290 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.39■□□□□ 0.38
CDH13P55290 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.39■□□□□ 0.38
CDH13P55290 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.39■□□□□ 0.38
CDH13P55290 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CDH13P55290 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CDH13P55290 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CDH13P55290 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH13P55290 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH13P55290 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH13P55290 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH13P55290 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH13P55290 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH13P55290 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CDH13P55290 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.39■□□□□ 0.37
CDH13P55290 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH13P55290 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms