Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 KRT126P-201ENST00000549467 1181 ntBASIC18.35■□□□□ 0.53
NEK3P51956 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.35■□□□□ 0.53
NEK3P51956 MIR3652-201ENST00000579335 131 ntBASIC18.35■□□□□ 0.53
NEK3P51956 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
NEK3P51956 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
NEK3P51956 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.35■□□□□ 0.53
NEK3P51956 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
NEK3P51956 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
NEK3P51956 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NEK3P51956 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NEK3P51956 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NEK3P51956 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NEK3P51956 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NEK3P51956 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NEK3P51956 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NEK3P51956 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NEK3P51956 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NEK3P51956 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.35■□□□□ 0.53
NEK3P51956 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.35■□□□□ 0.53
NEK3P51956 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEK3P51956 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NEK3P51956 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEK3P51956 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEK3P51956 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEK3P51956 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.34■□□□□ 0.53
NEK3P51956 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEK3P51956 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NEK3P51956 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEK3P51956 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NEK3P51956 DRAXINP1-201ENST00000437611 948 ntBASIC18.34■□□□□ 0.53
NEK3P51956 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.34■□□□□ 0.53
NEK3P51956 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NEK3P51956 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEK3P51956 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.34■□□□□ 0.53
NEK3P51956 TPSP2-201ENST00000561760 610 ntBASIC18.34■□□□□ 0.53
NEK3P51956 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
NEK3P51956 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.34■□□□□ 0.53
NEK3P51956 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
NEK3P51956 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.34■□□□□ 0.53
NEK3P51956 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEK3P51956 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.34■□□□□ 0.53
NEK3P51956 IGHV3-41-201ENST00000613121 348 ntBASIC18.34■□□□□ 0.53
NEK3P51956 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
NEK3P51956 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.34■□□□□ 0.53
NEK3P51956 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
NEK3P51956 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEK3P51956 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NEK3P51956 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
NEK3P51956 PHGDH-209ENST00000641074 1780 ntBASIC18.34■□□□□ 0.53
NEK3P51956 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
NEK3P51956 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
NEK3P51956 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEK3P51956 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEK3P51956 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEK3P51956 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEK3P51956 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEK3P51956 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEK3P51956 AC006116.8-202ENST00000587620 1550 ntBASIC18.34■□□□□ 0.53
NEK3P51956 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEK3P51956 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
NEK3P51956 AC099343.3-201ENST00000605834 2503 ntBASIC18.33■□□□□ 0.53
NEK3P51956 BCL2-203ENST00000589955 5011 ntBASIC18.33■□□□□ 0.53
NEK3P51956 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NEK3P51956 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NEK3P51956 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NEK3P51956 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NEK3P51956 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.33■□□□□ 0.53
NEK3P51956 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.53
NEK3P51956 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NEK3P51956 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NEK3P51956 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NEK3P51956 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NEK3P51956 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
NEK3P51956 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NEK3P51956 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
NEK3P51956 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
NEK3P51956 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.33■□□□□ 0.52
NEK3P51956 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.52
NEK3P51956 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.33■□□□□ 0.52
NEK3P51956 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NEK3P51956 GUSBP12-201ENST00000513727 720 ntBASIC18.33■□□□□ 0.52
NEK3P51956 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.33■□□□□ 0.52
NEK3P51956 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
NEK3P51956 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.33■□□□□ 0.52
NEK3P51956 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.33■□□□□ 0.52
NEK3P51956 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
NEK3P51956 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.33■□□□□ 0.52
NEK3P51956 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.33■□□□□ 0.52
NEK3P51956 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NEK3P51956 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
NEK3P51956 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.33■□□□□ 0.52
NEK3P51956 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NEK3P51956 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NEK3P51956 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NEK3P51956 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
NEK3P51956 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NEK3P51956 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
NEK3P51956 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
NEK3P51956 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NEK3P51956 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms