Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.6■□□□□ 0.73
CDK7P50613 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK7P50613 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CDK7P50613 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK7P50613 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK7P50613 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK7P50613 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK7P50613 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK7P50613 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.6■□□□□ 0.73
CDK7P50613 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.6■□□□□ 0.73
CDK7P50613 ELK2BP-201ENST00000415014 1224 ntBASIC19.6■□□□□ 0.73
CDK7P50613 AL020989.1-201ENST00000422979 469 ntBASIC19.6■□□□□ 0.73
CDK7P50613 CNN2P11-201ENST00000429351 262 ntBASIC19.6■□□□□ 0.73
CDK7P50613 PRSS29P-201ENST00000440800 595 ntBASIC19.6■□□□□ 0.73
CDK7P50613 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDK7P50613 AC108073.2-201ENST00000464002 357 ntBASIC19.6■□□□□ 0.73
CDK7P50613 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.6■□□□□ 0.73
CDK7P50613 IGHV3-65-201ENST00000523210 341 ntBASIC19.6■□□□□ 0.73
CDK7P50613 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.6■□□□□ 0.73
CDK7P50613 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.6■□□□□ 0.73
CDK7P50613 AL513190.1-201ENST00000621254 727 ntBASIC19.6■□□□□ 0.73
CDK7P50613 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDK7P50613 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK7P50613 GMCL1P1-201ENST00000463439 1581 ntBASIC19.6■□□□□ 0.73
CDK7P50613 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK7P50613 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDK7P50613 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.6■□□□□ 0.73
CDK7P50613 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CDK7P50613 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDK7P50613 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDK7P50613 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CDK7P50613 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
CDK7P50613 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.59■□□□□ 0.73
CDK7P50613 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.59■□□□□ 0.73
CDK7P50613 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CDK7P50613 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.59■□□□□ 0.73
CDK7P50613 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDK7P50613 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDK7P50613 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.59■□□□□ 0.73
CDK7P50613 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDK7P50613 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDK7P50613 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.59■□□□□ 0.73
CDK7P50613 AC018845.2-201ENST00000568326 409 ntBASIC19.59■□□□□ 0.73
CDK7P50613 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CDK7P50613 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CDK7P50613 AC008667.4-201ENST00000607370 168 ntBASIC19.59■□□□□ 0.73
CDK7P50613 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.59■□□□□ 0.73
CDK7P50613 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.59■□□□□ 0.73
CDK7P50613 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CDK7P50613 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDK7P50613 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDK7P50613 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
CDK7P50613 AL353593.2-201ENST00000602529 1483 ntBASIC19.59■□□□□ 0.73
CDK7P50613 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CDK7P50613 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
CDK7P50613 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDK7P50613 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDK7P50613 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CDK7P50613 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDK7P50613 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.58■□□□□ 0.73
CDK7P50613 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CDK7P50613 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CDK7P50613 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDK7P50613 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDK7P50613 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDK7P50613 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.58■□□□□ 0.72
CDK7P50613 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.58■□□□□ 0.72
CDK7P50613 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
CDK7P50613 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDK7P50613 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.58■□□□□ 0.72
CDK7P50613 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CDK7P50613 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDK7P50613 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDK7P50613 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDK7P50613 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDK7P50613 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDK7P50613 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.58■□□□□ 0.72
CDK7P50613 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.58■□□□□ 0.72
CDK7P50613 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.57■□□□□ 0.72
CDK7P50613 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDK7P50613 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
CDK7P50613 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDK7P50613 ELL2P1-201ENST00000413990 1906 ntBASIC19.57■□□□□ 0.72
CDK7P50613 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.57■□□□□ 0.72
CDK7P50613 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDK7P50613 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.57■□□□□ 0.72
CDK7P50613 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDK7P50613 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.57■□□□□ 0.72
CDK7P50613 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDK7P50613 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDK7P50613 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.57■□□□□ 0.72
CDK7P50613 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.57■□□□□ 0.72
CDK7P50613 AP002472.1-201ENST00000577490 586 ntBASIC19.57■□□□□ 0.72
CDK7P50613 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.57■□□□□ 0.72
CDK7P50613 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.57■□□□□ 0.72
CDK7P50613 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDK7P50613 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDK7P50613 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDK7P50613 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CDK7P50613 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms