Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TM4SF4P48230 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TM4SF4P48230 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC20.13■□□□□ 0.81
TM4SF4P48230 FO538757.1-201ENST00000623083 1397 ntBASIC20.13■□□□□ 0.81
TM4SF4P48230 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TM4SF4P48230 WRB-204ENST00000398753 699 ntTSL 3 BASIC20.13■□□□□ 0.81
TM4SF4P48230 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC20.13■□□□□ 0.81
TM4SF4P48230 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
TM4SF4P48230 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC20.13■□□□□ 0.81
TM4SF4P48230 SLC25A39P2-201ENST00000537614 270 ntBASIC20.13■□□□□ 0.81
TM4SF4P48230 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TM4SF4P48230 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC20.13■□□□□ 0.81
TM4SF4P48230 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC20.13■□□□□ 0.81
TM4SF4P48230 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC20.13■□□□□ 0.81
TM4SF4P48230 BSG-214ENST00000614867 960 ntTSL 3 BASIC20.13■□□□□ 0.81
TM4SF4P48230 AL358472.5-202ENST00000641448 1267 ntBASIC20.13■□□□□ 0.81
TM4SF4P48230 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TM4SF4P48230 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TM4SF4P48230 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TM4SF4P48230 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
TM4SF4P48230 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.13■□□□□ 0.81
TM4SF4P48230 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
TM4SF4P48230 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TM4SF4P48230 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TM4SF4P48230 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TM4SF4P48230 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TM4SF4P48230 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.12■□□□□ 0.81
TM4SF4P48230 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TM4SF4P48230 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TM4SF4P48230 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.12■□□□□ 0.81
TM4SF4P48230 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TM4SF4P48230 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC20.12■□□□□ 0.81
TM4SF4P48230 KRT18P32-201ENST00000424695 1287 ntBASIC20.12■□□□□ 0.81
TM4SF4P48230 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC20.12■□□□□ 0.81
TM4SF4P48230 CRB3P1-201ENST00000449338 276 ntBASIC20.12■□□□□ 0.81
TM4SF4P48230 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TM4SF4P48230 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC20.12■□□□□ 0.81
TM4SF4P48230 NOP2-220ENST00000545915 630 ntTSL 2 BASIC20.12■□□□□ 0.81
TM4SF4P48230 AC243562.1-201ENST00000560672 389 ntBASIC20.12■□□□□ 0.81
TM4SF4P48230 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
TM4SF4P48230 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
TM4SF4P48230 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC20.12■□□□□ 0.81
TM4SF4P48230 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TM4SF4P48230 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
TM4SF4P48230 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.12■□□□□ 0.81
TM4SF4P48230 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TM4SF4P48230 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
TM4SF4P48230 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TM4SF4P48230 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.11■□□□□ 0.81
TM4SF4P48230 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
TM4SF4P48230 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
TM4SF4P48230 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
TM4SF4P48230 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TM4SF4P48230 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC20.11■□□□□ 0.81
TM4SF4P48230 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.11■□□□□ 0.81
TM4SF4P48230 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
TM4SF4P48230 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TM4SF4P48230 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TM4SF4P48230 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC20.11■□□□□ 0.81
TM4SF4P48230 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC20.11■□□□□ 0.81
TM4SF4P48230 AC140658.5-201ENST00000438532 169 ntBASIC20.11■□□□□ 0.81
TM4SF4P48230 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
TM4SF4P48230 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC20.11■□□□□ 0.81
TM4SF4P48230 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TM4SF4P48230 MIR6752-201ENST00000618442 71 ntBASIC20.11■□□□□ 0.81
TM4SF4P48230 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.11■□□□□ 0.81
TM4SF4P48230 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
TM4SF4P48230 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TM4SF4P48230 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.11■□□□□ 0.81
TM4SF4P48230 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC20.11■□□□□ 0.81
TM4SF4P48230 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TM4SF4P48230 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TM4SF4P48230 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.11■□□□□ 0.81
TM4SF4P48230 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TM4SF4P48230 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
TM4SF4P48230 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC20.11■□□□□ 0.81
TM4SF4P48230 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
TM4SF4P48230 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.1■□□□□ 0.81
TM4SF4P48230 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TM4SF4P48230 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
TM4SF4P48230 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TM4SF4P48230 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TM4SF4P48230 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.1■□□□□ 0.81
TM4SF4P48230 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.1■□□□□ 0.81
TM4SF4P48230 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC20.1■□□□□ 0.81
TM4SF4P48230 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TM4SF4P48230 PCDHAC2-203ENST00000615316 3011 ntBASIC20.1■□□□□ 0.81
TM4SF4P48230 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TM4SF4P48230 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.1■□□□□ 0.81
TM4SF4P48230 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
TM4SF4P48230 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC20.1■□□□□ 0.81
TM4SF4P48230 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
TM4SF4P48230 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TM4SF4P48230 IGHV3-52-201ENST00000519770 353 ntBASIC20.1■□□□□ 0.81
TM4SF4P48230 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TM4SF4P48230 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC20.1■□□□□ 0.81
TM4SF4P48230 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC20.1■□□□□ 0.81
TM4SF4P48230 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TM4SF4P48230 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC20.1■□□□□ 0.81
TM4SF4P48230 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms