Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN3P26045 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN3P26045 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PTPN3P26045 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN3P26045 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN3P26045 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.14■□□□□ 0.49
PTPN3P26045 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.14■□□□□ 0.49
PTPN3P26045 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.14■□□□□ 0.49
PTPN3P26045 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.14■□□□□ 0.49
PTPN3P26045 KRT8P26-201ENST00000534154 1276 ntBASIC18.14■□□□□ 0.49
PTPN3P26045 AL592071.1-201ENST00000611956 408 ntBASIC18.14■□□□□ 0.49
PTPN3P26045 AL590326.2-201ENST00000625139 305 ntBASIC18.14■□□□□ 0.49
PTPN3P26045 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN3P26045 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.14■□□□□ 0.49
PTPN3P26045 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.14■□□□□ 0.49
PTPN3P26045 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.14■□□□□ 0.49
PTPN3P26045 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.14■□□□□ 0.49
PTPN3P26045 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.14■□□□□ 0.49
PTPN3P26045 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
PTPN3P26045 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN3P26045 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN3P26045 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN3P26045 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN3P26045 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
PTPN3P26045 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.13■□□□□ 0.49
PTPN3P26045 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN3P26045 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.13■□□□□ 0.49
PTPN3P26045 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.13■□□□□ 0.49
PTPN3P26045 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PTPN3P26045 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN3P26045 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN3P26045 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN3P26045 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PTPN3P26045 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN3P26045 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN3P26045 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN3P26045 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN3P26045 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
PTPN3P26045 AC096633.1-201ENST00000422446 749 ntBASIC18.13■□□□□ 0.49
PTPN3P26045 AL845331.1-201ENST00000424978 1190 ntBASIC18.13■□□□□ 0.49
PTPN3P26045 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.13■□□□□ 0.49
PTPN3P26045 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.13■□□□□ 0.49
PTPN3P26045 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN3P26045 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.13■□□□□ 0.49
PTPN3P26045 AC124864.1-201ENST00000623408 392 ntBASIC18.13■□□□□ 0.49
PTPN3P26045 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.13■□□□□ 0.49
PTPN3P26045 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.13■□□□□ 0.49
PTPN3P26045 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN3P26045 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.13■□□□□ 0.49
PTPN3P26045 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PTPN3P26045 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.13■□□□□ 0.49
PTPN3P26045 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.13■□□□□ 0.49
PTPN3P26045 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN3P26045 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN3P26045 HLA-J-201ENST00000462773 1622 ntBASIC18.12■□□□□ 0.49
PTPN3P26045 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN3P26045 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.12■□□□□ 0.49
PTPN3P26045 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN3P26045 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PTPN3P26045 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
PTPN3P26045 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.12■□□□□ 0.49
PTPN3P26045 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.12■□□□□ 0.49
PTPN3P26045 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PTPN3P26045 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN3P26045 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN3P26045 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN3P26045 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN3P26045 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN3P26045 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN3P26045 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN3P26045 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN3P26045 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.12■□□□□ 0.49
PTPN3P26045 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.12■□□□□ 0.49
PTPN3P26045 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.12■□□□□ 0.49
PTPN3P26045 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN3P26045 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.12■□□□□ 0.49
PTPN3P26045 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.12■□□□□ 0.49
PTPN3P26045 AC087388.1-201ENST00000571370 1112 ntBASIC18.12■□□□□ 0.49
PTPN3P26045 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN3P26045 LINC01451-201ENST00000623792 534 ntBASIC18.12■□□□□ 0.49
PTPN3P26045 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN3P26045 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PTPN3P26045 FZD10-202ENST00000539839 3282 ntBASIC18.12■□□□□ 0.49
PTPN3P26045 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN3P26045 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.12■□□□□ 0.49
PTPN3P26045 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN3P26045 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN3P26045 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.11■□□□□ 0.49
PTPN3P26045 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN3P26045 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN3P26045 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN3P26045 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN3P26045 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN3P26045 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN3P26045 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.11■□□□□ 0.49
PTPN3P26045 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN3P26045 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
PTPN3P26045 AC090616.6-201ENST00000582640 721 ntBASIC18.11■□□□□ 0.49
PTPN3P26045 AL353801.3-201ENST00000609898 542 ntBASIC18.11■□□□□ 0.49
PTPN3P26045 AC116407.4-201ENST00000623319 1061 ntBASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms