Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLR2AP24928 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
POLR2AP24928 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
POLR2AP24928 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.71■□□□□ 0.91
POLR2AP24928 AC092474.2-201ENST00000424288 719 ntBASIC20.71■□□□□ 0.91
POLR2AP24928 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLR2AP24928 TSPY16P-201ENST00000449843 468 ntBASIC20.71■□□□□ 0.91
POLR2AP24928 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC20.71■□□□□ 0.91
POLR2AP24928 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLR2AP24928 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.71■□□□□ 0.91
POLR2AP24928 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLR2AP24928 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.71■□□□□ 0.91
POLR2AP24928 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLR2AP24928 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLR2AP24928 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
POLR2AP24928 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
POLR2AP24928 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLR2AP24928 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
POLR2AP24928 PMS2P4-201ENST00000412466 1052 ntBASIC20.7■□□□□ 0.9
POLR2AP24928 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
POLR2AP24928 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC20.7■□□□□ 0.9
POLR2AP24928 MEIS3P1-201ENST00000495167 958 ntBASIC20.7■□□□□ 0.9
POLR2AP24928 CXCL1P1-201ENST00000502804 216 ntBASIC20.7■□□□□ 0.9
POLR2AP24928 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC20.7■□□□□ 0.9
POLR2AP24928 VPS29-207ENST00000549970 818 ntTSL 3 BASIC20.7■□□□□ 0.9
POLR2AP24928 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC20.7■□□□□ 0.9
POLR2AP24928 AC025678.2-201ENST00000562061 970 ntBASIC20.7■□□□□ 0.9
POLR2AP24928 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC20.7■□□□□ 0.9
POLR2AP24928 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC20.7■□□□□ 0.9
POLR2AP24928 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
POLR2AP24928 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLR2AP24928 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLR2AP24928 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLR2AP24928 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
POLR2AP24928 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC20.7■□□□□ 0.9
POLR2AP24928 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
POLR2AP24928 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
POLR2AP24928 AC009949.1-201ENST00000623048 1830 ntBASIC20.7■□□□□ 0.9
POLR2AP24928 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLR2AP24928 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC20.7■□□□□ 0.9
POLR2AP24928 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC20.7■□□□□ 0.9
POLR2AP24928 AC051619.7-201ENST00000568314 623 ntBASIC20.7■□□□□ 0.9
POLR2AP24928 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLR2AP24928 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLR2AP24928 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.7■□□□□ 0.9
POLR2AP24928 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.7■□□□□ 0.9
POLR2AP24928 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
POLR2AP24928 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR2AP24928 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
POLR2AP24928 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR2AP24928 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR2AP24928 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
POLR2AP24928 AL121761.2-201ENST00000598007 1648 ntBASIC20.69■□□□□ 0.9
POLR2AP24928 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR2AP24928 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR2AP24928 PTCHD3P3-201ENST00000403073 906 ntBASIC20.69■□□□□ 0.9
POLR2AP24928 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC20.69■□□□□ 0.9
POLR2AP24928 DUX4L27-201ENST00000554796 1261 ntBASIC20.69■□□□□ 0.9
POLR2AP24928 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC20.69■□□□□ 0.9
POLR2AP24928 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.69■□□□□ 0.9
POLR2AP24928 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC20.69■□□□□ 0.9
POLR2AP24928 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR2AP24928 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.69■□□□□ 0.9
POLR2AP24928 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.69■□□□□ 0.9
POLR2AP24928 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR2AP24928 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
POLR2AP24928 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR2AP24928 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR2AP24928 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC20.68■□□□□ 0.9
POLR2AP24928 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC20.68■□□□□ 0.9
POLR2AP24928 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC20.68■□□□□ 0.9
POLR2AP24928 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC20.68■□□□□ 0.9
POLR2AP24928 AL135744.1-201ENST00000565098 629 ntBASIC20.68■□□□□ 0.9
POLR2AP24928 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC20.68■□□□□ 0.9
POLR2AP24928 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.68■□□□□ 0.9
POLR2AP24928 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR2AP24928 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
POLR2AP24928 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
POLR2AP24928 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR2AP24928 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
POLR2AP24928 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
POLR2AP24928 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC20.68■□□□□ 0.9
POLR2AP24928 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC20.68■□□□□ 0.9
POLR2AP24928 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR2AP24928 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC20.68■□□□□ 0.9
POLR2AP24928 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC20.68■□□□□ 0.9
POLR2AP24928 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR2AP24928 AF228730.6-201ENST00000641497 218 ntBASIC20.68■□□□□ 0.9
POLR2AP24928 AC084121.3-201ENST00000641716 218 ntBASIC20.68■□□□□ 0.9
POLR2AP24928 AC105233.6-201ENST00000642093 218 ntBASIC20.68■□□□□ 0.9
POLR2AP24928 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC20.68■□□□□ 0.9
POLR2AP24928 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR2AP24928 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
POLR2AP24928 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
POLR2AP24928 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.68■□□□□ 0.9
POLR2AP24928 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.67■□□□□ 0.9
POLR2AP24928 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR2AP24928 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
POLR2AP24928 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.67■□□□□ 0.9
POLR2AP24928 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms