Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCND1P24385 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCND1P24385 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCND1P24385 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.95■□□□□ 0.46
CCND1P24385 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCND1P24385 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCND1P24385 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCND1P24385 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCND1P24385 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CCND1P24385 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CCND1P24385 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CCND1P24385 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCND1P24385 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCND1P24385 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.94■□□□□ 0.46
CCND1P24385 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCND1P24385 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCND1P24385 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCND1P24385 ECEL1P3-201ENST00000427961 737 ntBASIC17.94■□□□□ 0.46
CCND1P24385 LIN28AP1-201ENST00000429574 405 ntBASIC17.94■□□□□ 0.46
CCND1P24385 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.94■□□□□ 0.46
CCND1P24385 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.94■□□□□ 0.46
CCND1P24385 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.94■□□□□ 0.46
CCND1P24385 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.94■□□□□ 0.46
CCND1P24385 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.94■□□□□ 0.46
CCND1P24385 MIR3180-4-201ENST00000582223 153 ntBASIC17.94■□□□□ 0.46
CCND1P24385 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.94■□□□□ 0.46
CCND1P24385 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CCND1P24385 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CCND1P24385 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCND1P24385 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCND1P24385 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.94■□□□□ 0.46
CCND1P24385 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCND1P24385 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCND1P24385 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CCND1P24385 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CCND1P24385 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.94■□□□□ 0.46
CCND1P24385 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCND1P24385 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.94■□□□□ 0.46
CCND1P24385 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCND1P24385 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCND1P24385 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.93■□□□□ 0.46
CCND1P24385 REXO1L9P-201ENST00000604264 2108 ntBASIC17.93■□□□□ 0.46
CCND1P24385 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCND1P24385 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCND1P24385 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCND1P24385 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCND1P24385 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CCND1P24385 AL499627.1-201ENST00000569373 2188 ntBASIC17.93■□□□□ 0.46
CCND1P24385 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CCND1P24385 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCND1P24385 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCND1P24385 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCND1P24385 KRT8P50-201ENST00000562022 1438 ntBASIC17.93■□□□□ 0.46
CCND1P24385 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.93■□□□□ 0.46
CCND1P24385 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCND1P24385 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.93■□□□□ 0.46
CCND1P24385 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.93■□□□□ 0.46
CCND1P24385 LINC01023-201ENST00000606054 436 ntBASIC17.93■□□□□ 0.46
CCND1P24385 AC005363.2-201ENST00000618631 242 ntBASIC17.93■□□□□ 0.46
CCND1P24385 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.93■□□□□ 0.46
CCND1P24385 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCND1P24385 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCND1P24385 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCND1P24385 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCND1P24385 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCND1P24385 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
CCND1P24385 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCND1P24385 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCND1P24385 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCND1P24385 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCND1P24385 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCND1P24385 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCND1P24385 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.92■□□□□ 0.46
CCND1P24385 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCND1P24385 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CCND1P24385 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.92■□□□□ 0.46
CCND1P24385 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCND1P24385 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCND1P24385 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCND1P24385 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCND1P24385 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCND1P24385 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CCND1P24385 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCND1P24385 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCND1P24385 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.92■□□□□ 0.46
CCND1P24385 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCND1P24385 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.92■□□□□ 0.46
CCND1P24385 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCND1P24385 LINC01126-201ENST00000623515 1646 ntBASIC17.92■□□□□ 0.46
CCND1P24385 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCND1P24385 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCND1P24385 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCND1P24385 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CCND1P24385 AC009947.2-201ENST00000444014 672 ntBASIC17.92■□□□□ 0.46
CCND1P24385 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCND1P24385 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.92■□□□□ 0.46
CCND1P24385 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.92■□□□□ 0.46
CCND1P24385 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCND1P24385 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CCND1P24385 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms