Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
KCNA3P22001 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
KCNA3P22001 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
KCNA3P22001 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.65■■□□□ 1.06
KCNA3P22001 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
KCNA3P22001 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
KCNA3P22001 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KCNA3P22001 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KCNA3P22001 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
KCNA3P22001 NABP1-203ENST00000409510 843 ntTSL 5 BASIC21.65■■□□□ 1.06
KCNA3P22001 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
KCNA3P22001 LINC00982-205ENST00000420957 435 ntBASIC21.65■■□□□ 1.06
KCNA3P22001 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
KCNA3P22001 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
KCNA3P22001 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KCNA3P22001 STK25P1-201ENST00000585406 838 ntBASIC21.65■■□□□ 1.06
KCNA3P22001 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KCNA3P22001 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KCNA3P22001 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
KCNA3P22001 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KCNA3P22001 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KCNA3P22001 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
KCNA3P22001 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KCNA3P22001 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.65■■□□□ 1.06
KCNA3P22001 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC21.65■■□□□ 1.06
KCNA3P22001 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.65■■□□□ 1.06
KCNA3P22001 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
KCNA3P22001 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
KCNA3P22001 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
KCNA3P22001 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
KCNA3P22001 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC21.64■■□□□ 1.06
KCNA3P22001 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC21.64■■□□□ 1.06
KCNA3P22001 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
KCNA3P22001 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
KCNA3P22001 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
KCNA3P22001 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
KCNA3P22001 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
KCNA3P22001 GATB-205ENST00000508611 605 ntTSL 2 BASIC21.64■■□□□ 1.05
KCNA3P22001 KRT8P48-201ENST00000515599 1220 ntBASIC21.64■■□□□ 1.05
KCNA3P22001 DUTP2-201ENST00000519164 463 ntBASIC21.64■■□□□ 1.05
KCNA3P22001 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC21.64■■□□□ 1.05
KCNA3P22001 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
KCNA3P22001 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
KCNA3P22001 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC21.64■■□□□ 1.05
KCNA3P22001 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
KCNA3P22001 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
KCNA3P22001 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.64■■□□□ 1.05
KCNA3P22001 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
KCNA3P22001 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC21.64■■□□□ 1.05
KCNA3P22001 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.64■■□□□ 1.05
KCNA3P22001 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
KCNA3P22001 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KCNA3P22001 AC093010.1-201ENST00000473625 1624 ntBASIC21.63■■□□□ 1.05
KCNA3P22001 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC21.63■■□□□ 1.05
KCNA3P22001 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC21.63■■□□□ 1.05
KCNA3P22001 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
KCNA3P22001 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
KCNA3P22001 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC21.63■■□□□ 1.05
KCNA3P22001 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
KCNA3P22001 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC21.63■■□□□ 1.05
KCNA3P22001 TIMM8BP1-201ENST00000452384 211 ntBASIC21.63■■□□□ 1.05
KCNA3P22001 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
KCNA3P22001 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC21.63■■□□□ 1.05
KCNA3P22001 AL512356.2-201ENST00000546955 174 ntBASIC21.63■■□□□ 1.05
KCNA3P22001 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC21.63■■□□□ 1.05
KCNA3P22001 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC21.63■■□□□ 1.05
KCNA3P22001 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC21.63■■□□□ 1.05
KCNA3P22001 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC21.63■■□□□ 1.05
KCNA3P22001 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
KCNA3P22001 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KCNA3P22001 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
KCNA3P22001 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KCNA3P22001 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
KCNA3P22001 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KCNA3P22001 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
KCNA3P22001 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
KCNA3P22001 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
KCNA3P22001 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
KCNA3P22001 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
KCNA3P22001 BASP1P1-201ENST00000430708 665 ntBASIC21.62■■□□□ 1.05
KCNA3P22001 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC21.62■■□□□ 1.05
KCNA3P22001 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC21.62■■□□□ 1.05
KCNA3P22001 AP005018.1-201ENST00000525475 301 ntBASIC21.62■■□□□ 1.05
KCNA3P22001 AC109462.3-201ENST00000573934 613 ntBASIC21.62■■□□□ 1.05
KCNA3P22001 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC21.62■■□□□ 1.05
KCNA3P22001 AC026120.1-201ENST00000611536 926 ntBASIC21.62■■□□□ 1.05
KCNA3P22001 ACTL9-202ENST00000612068 1252 ntBASIC21.62■■□□□ 1.05
KCNA3P22001 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
KCNA3P22001 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
KCNA3P22001 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
KCNA3P22001 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC21.62■■□□□ 1.05
KCNA3P22001 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
KCNA3P22001 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
KCNA3P22001 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
KCNA3P22001 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
KCNA3P22001 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC21.61■■□□□ 1.05
KCNA3P22001 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
KCNA3P22001 BSG-215ENST00000618006 1329 ntTSL 2 BASIC21.61■■□□□ 1.05
KCNA3P22001 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
KCNA3P22001 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms