Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CAPN3P20807 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CAPN3P20807 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CAPN3P20807 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CAPN3P20807 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.15■□□□□ 0.34
CAPN3P20807 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CAPN3P20807 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CAPN3P20807 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
CAPN3P20807 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CAPN3P20807 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CAPN3P20807 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.15■□□□□ 0.34
CAPN3P20807 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CAPN3P20807 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CAPN3P20807 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CAPN3P20807 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CAPN3P20807 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CAPN3P20807 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CAPN3P20807 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
CAPN3P20807 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN3P20807 AC092338.2-201ENST00000568827 1415 ntBASIC17.14■□□□□ 0.33
CAPN3P20807 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN3P20807 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.14■□□□□ 0.33
CAPN3P20807 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN3P20807 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN3P20807 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CAPN3P20807 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN3P20807 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN3P20807 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN3P20807 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.14■□□□□ 0.33
CAPN3P20807 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.14■□□□□ 0.33
CAPN3P20807 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CAPN3P20807 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.14■□□□□ 0.33
CAPN3P20807 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN3P20807 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN3P20807 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.14■□□□□ 0.33
CAPN3P20807 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.14■□□□□ 0.33
CAPN3P20807 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.14■□□□□ 0.33
CAPN3P20807 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.14■□□□□ 0.33
CAPN3P20807 TSPY17P-201ENST00000450329 467 ntBASIC17.14■□□□□ 0.33
CAPN3P20807 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN3P20807 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN3P20807 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN3P20807 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN3P20807 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.14■□□□□ 0.33
CAPN3P20807 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.14■□□□□ 0.33
CAPN3P20807 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CAPN3P20807 AP000550.4-202ENST00000639755 178 ntBASIC17.14■□□□□ 0.33
CAPN3P20807 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN3P20807 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.14■□□□□ 0.33
CAPN3P20807 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.14■□□□□ 0.33
CAPN3P20807 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN3P20807 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN3P20807 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN3P20807 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN3P20807 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CAPN3P20807 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.14■□□□□ 0.33
CAPN3P20807 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CAPN3P20807 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CAPN3P20807 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN3P20807 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.13■□□□□ 0.33
CAPN3P20807 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN3P20807 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN3P20807 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.13■□□□□ 0.33
CAPN3P20807 LINC00167-201ENST00000530583 1419 ntBASIC17.13■□□□□ 0.33
CAPN3P20807 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN3P20807 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CAPN3P20807 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.13■□□□□ 0.33
CAPN3P20807 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CAPN3P20807 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.13■□□□□ 0.33
CAPN3P20807 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.13■□□□□ 0.33
CAPN3P20807 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN3P20807 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN3P20807 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.13■□□□□ 0.33
CAPN3P20807 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN3P20807 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN3P20807 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CAPN3P20807 FAM8A6P-201ENST00000407496 1135 ntBASIC17.13■□□□□ 0.33
CAPN3P20807 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
CAPN3P20807 AC026396.1-201ENST00000419388 421 ntBASIC17.13■□□□□ 0.33
CAPN3P20807 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN3P20807 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.13■□□□□ 0.33
CAPN3P20807 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.13■□□□□ 0.33
CAPN3P20807 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.13■□□□□ 0.33
CAPN3P20807 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.13■□□□□ 0.33
CAPN3P20807 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN3P20807 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.13■□□□□ 0.33
CAPN3P20807 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CAPN3P20807 AL121894.2-201ENST00000602977 491 ntBASIC17.13■□□□□ 0.33
CAPN3P20807 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN3P20807 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN3P20807 HLA-J-201ENST00000462773 1622 ntBASIC17.13■□□□□ 0.33
CAPN3P20807 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.13■□□□□ 0.33
CAPN3P20807 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN3P20807 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CAPN3P20807 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CAPN3P20807 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN3P20807 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN3P20807 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CAPN3P20807 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN3P20807 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms