Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD58P19256 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD58P19256 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD58P19256 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD58P19256 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CD58P19256 ATP5G2P1-201ENST00000433580 426 ntBASIC19.11■□□□□ 0.65
CD58P19256 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
CD58P19256 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CD58P19256 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.11■□□□□ 0.65
CD58P19256 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.11■□□□□ 0.65
CD58P19256 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD58P19256 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CD58P19256 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.11■□□□□ 0.65
CD58P19256 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD58P19256 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.11■□□□□ 0.65
CD58P19256 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CD58P19256 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.11■□□□□ 0.65
CD58P19256 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CD58P19256 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CD58P19256 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD58P19256 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CD58P19256 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD58P19256 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CD58P19256 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CD58P19256 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CD58P19256 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD58P19256 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.1■□□□□ 0.65
CD58P19256 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD58P19256 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD58P19256 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD58P19256 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CD58P19256 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD58P19256 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CD58P19256 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CD58P19256 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CD58P19256 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD58P19256 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CD58P19256 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
CD58P19256 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.1■□□□□ 0.65
CD58P19256 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD58P19256 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD58P19256 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CD58P19256 DRAXINP1-201ENST00000437611 948 ntBASIC19.1■□□□□ 0.65
CD58P19256 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CD58P19256 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CD58P19256 AP005901.3-202ENST00000581653 237 ntBASIC19.1■□□□□ 0.65
CD58P19256 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.1■□□□□ 0.65
CD58P19256 AC092329.2-201ENST00000598402 547 ntBASIC19.1■□□□□ 0.65
CD58P19256 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.1■□□□□ 0.65
CD58P19256 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.1■□□□□ 0.65
CD58P19256 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CD58P19256 AC134043.2-201ENST00000624206 2238 ntBASIC19.1■□□□□ 0.65
CD58P19256 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD58P19256 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
CD58P19256 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
CD58P19256 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD58P19256 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.1■□□□□ 0.65
CD58P19256 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CD58P19256 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.1■□□□□ 0.65
CD58P19256 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CD58P19256 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.1■□□□□ 0.65
CD58P19256 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD58P19256 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD58P19256 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.09■□□□□ 0.65
CD58P19256 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD58P19256 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD58P19256 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CD58P19256 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.09■□□□□ 0.65
CD58P19256 AC233702.3-201ENST00000578656 1387 ntBASIC19.09■□□□□ 0.65
CD58P19256 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD58P19256 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CD58P19256 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
CD58P19256 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CD58P19256 AP000867.3-201ENST00000524675 377 ntBASIC19.09■□□□□ 0.65
CD58P19256 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CD58P19256 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.09■□□□□ 0.65
CD58P19256 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.09■□□□□ 0.65
CD58P19256 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.09■□□□□ 0.65
CD58P19256 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CD58P19256 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD58P19256 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
CD58P19256 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD58P19256 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CD58P19256 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD58P19256 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD58P19256 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CD58P19256 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD58P19256 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.09■□□□□ 0.65
CD58P19256 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD58P19256 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD58P19256 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD58P19256 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CD58P19256 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CD58P19256 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.08■□□□□ 0.65
CD58P19256 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.08■□□□□ 0.65
CD58P19256 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.08■□□□□ 0.65
CD58P19256 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
CD58P19256 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.08■□□□□ 0.65
CD58P19256 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CD58P19256 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms