Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ERCC2P18074 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ERCC2P18074 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ERCC2P18074 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ERCC2P18074 REXO1L11P-201ENST00000620964 1927 ntBASIC18.31■□□□□ 0.52
ERCC2P18074 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ERCC2P18074 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ERCC2P18074 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ERCC2P18074 AC125634.1-201ENST00000438758 1403 ntBASIC18.31■□□□□ 0.52
ERCC2P18074 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ERCC2P18074 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.31■□□□□ 0.52
ERCC2P18074 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ERCC2P18074 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ERCC2P18074 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
ERCC2P18074 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ERCC2P18074 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ERCC2P18074 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.3■□□□□ 0.52
ERCC2P18074 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ERCC2P18074 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ERCC2P18074 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.3■□□□□ 0.52
ERCC2P18074 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ERCC2P18074 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
ERCC2P18074 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ERCC2P18074 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ERCC2P18074 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ERCC2P18074 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ERCC2P18074 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ERCC2P18074 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.3■□□□□ 0.52
ERCC2P18074 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.3■□□□□ 0.52
ERCC2P18074 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.3■□□□□ 0.52
ERCC2P18074 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.3■□□□□ 0.52
ERCC2P18074 MIR3180-1-201ENST00000580374 94 ntBASIC18.3■□□□□ 0.52
ERCC2P18074 MIR3180-3-201ENST00000584616 94 ntBASIC18.3■□□□□ 0.52
ERCC2P18074 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ERCC2P18074 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.3■□□□□ 0.52
ERCC2P18074 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ERCC2P18074 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ERCC2P18074 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.3■□□□□ 0.52
ERCC2P18074 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ERCC2P18074 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.3■□□□□ 0.52
ERCC2P18074 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.3■□□□□ 0.52
ERCC2P18074 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
ERCC2P18074 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.3■□□□□ 0.52
ERCC2P18074 AC010460.3-201ENST00000511359 1579 ntBASIC18.3■□□□□ 0.52
ERCC2P18074 AC233702.3-201ENST00000578656 1387 ntBASIC18.3■□□□□ 0.52
ERCC2P18074 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ERCC2P18074 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.29■□□□□ 0.52
ERCC2P18074 BX276092.7-203ENST00000637198 1536 ntBASIC18.29■□□□□ 0.52
ERCC2P18074 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.29■□□□□ 0.52
ERCC2P18074 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
ERCC2P18074 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
ERCC2P18074 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
ERCC2P18074 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ERCC2P18074 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.29■□□□□ 0.52
ERCC2P18074 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.29■□□□□ 0.52
ERCC2P18074 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ERCC2P18074 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ERCC2P18074 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ERCC2P18074 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ERCC2P18074 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
ERCC2P18074 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
ERCC2P18074 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ERCC2P18074 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ERCC2P18074 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ERCC2P18074 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.29■□□□□ 0.52
ERCC2P18074 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.29■□□□□ 0.52
ERCC2P18074 TOB2P1-201ENST00000469761 992 ntBASIC18.29■□□□□ 0.52
ERCC2P18074 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.29■□□□□ 0.52
ERCC2P18074 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ERCC2P18074 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
ERCC2P18074 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.29■□□□□ 0.52
ERCC2P18074 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
ERCC2P18074 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.29■□□□□ 0.52
ERCC2P18074 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.29■□□□□ 0.52
ERCC2P18074 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.29■□□□□ 0.52
ERCC2P18074 AL138831.2-201ENST00000606564 490 ntBASIC18.29■□□□□ 0.52
ERCC2P18074 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ERCC2P18074 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
ERCC2P18074 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ERCC2P18074 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ERCC2P18074 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.29■□□□□ 0.52
ERCC2P18074 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ERCC2P18074 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.29■□□□□ 0.52
ERCC2P18074 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.29■□□□□ 0.52
ERCC2P18074 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
ERCC2P18074 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ERCC2P18074 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ERCC2P18074 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.29■□□□□ 0.52
ERCC2P18074 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ERCC2P18074 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ERCC2P18074 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC2P18074 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC2P18074 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC2P18074 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC2P18074 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC2P18074 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.28■□□□□ 0.52
ERCC2P18074 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC2P18074 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC2P18074 ATP5G2P1-201ENST00000433580 426 ntBASIC18.28■□□□□ 0.52
ERCC2P18074 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms