Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
CFTRP13569 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
CFTRP13569 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
CFTRP13569 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CFTRP13569 AC063926.2-201ENST00000623766 1308 ntBASIC30.19■■■□□ 2.42
CFTRP13569 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CFTRP13569 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CFTRP13569 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC30.19■■■□□ 2.42
CFTRP13569 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC30.19■■■□□ 2.42
CFTRP13569 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC30.19■■■□□ 2.42
CFTRP13569 GAPDHP21-201ENST00000450301 1010 ntBASIC30.19■■■□□ 2.42
CFTRP13569 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC30.19■■■□□ 2.42
CFTRP13569 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CFTRP13569 AFG3L1P-217ENST00000557444 2447 ntBASIC30.19■■■□□ 2.42
CFTRP13569 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC30.19■■■□□ 2.42
CFTRP13569 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC30.19■■■□□ 2.42
CFTRP13569 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC30.19■■■□□ 2.42
CFTRP13569 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CFTRP13569 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
CFTRP13569 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CFTRP13569 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CFTRP13569 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CFTRP13569 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CFTRP13569 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CFTRP13569 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC30.19■■■□□ 2.42
CFTRP13569 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC30.19■■■□□ 2.42
CFTRP13569 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC30.19■■■□□ 2.42
CFTRP13569 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC30.19■■■□□ 2.42
CFTRP13569 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CFTRP13569 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CFTRP13569 PI4KAP1-204ENST00000612579 1703 ntBASIC30.18■■■□□ 2.42
CFTRP13569 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC30.18■■■□□ 2.42
CFTRP13569 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
CFTRP13569 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
CFTRP13569 BX276092.7-203ENST00000637198 1536 ntBASIC30.18■■■□□ 2.42
CFTRP13569 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
CFTRP13569 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CFTRP13569 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
CFTRP13569 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
CFTRP13569 AC140658.5-201ENST00000438532 169 ntBASIC30.18■■■□□ 2.42
CFTRP13569 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC30.18■■■□□ 2.42
CFTRP13569 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
CFTRP13569 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC30.17■■■□□ 2.42
CFTRP13569 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC30.17■■■□□ 2.42
CFTRP13569 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
CFTRP13569 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC30.17■■■□□ 2.42
CFTRP13569 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CFTRP13569 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
CFTRP13569 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
CFTRP13569 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC30.17■■■□□ 2.42
CFTRP13569 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CFTRP13569 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CFTRP13569 FAM207CP-201ENST00000443486 507 ntBASIC30.17■■■□□ 2.42
CFTRP13569 AC069335.1-201ENST00000489972 472 ntBASIC30.17■■■□□ 2.42
CFTRP13569 SLC25A6P2-201ENST00000497974 877 ntBASIC30.17■■■□□ 2.42
CFTRP13569 TERF1P3-201ENST00000505638 1227 ntBASIC30.17■■■□□ 2.42
CFTRP13569 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CFTRP13569 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC30.17■■■□□ 2.42
CFTRP13569 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC30.17■■■□□ 2.42
CFTRP13569 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
CFTRP13569 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC30.16■■■□□ 2.42
CFTRP13569 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CFTRP13569 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC30.16■■■□□ 2.42
CFTRP13569 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC30.16■■■□□ 2.42
CFTRP13569 AC002056.1-201ENST00000395613 760 ntBASIC30.16■■■□□ 2.42
CFTRP13569 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC30.16■■■□□ 2.42
CFTRP13569 FAM58DP-201ENST00000428076 619 ntBASIC30.16■■■□□ 2.42
CFTRP13569 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC30.16■■■□□ 2.42
CFTRP13569 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC30.16■■■□□ 2.42
CFTRP13569 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC30.16■■■□□ 2.42
CFTRP13569 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC30.16■■■□□ 2.42
CFTRP13569 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC30.16■■■□□ 2.42
CFTRP13569 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC30.16■■■□□ 2.42
CFTRP13569 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC30.16■■■□□ 2.42
CFTRP13569 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC30.16■■■□□ 2.42
CFTRP13569 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
CFTRP13569 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CFTRP13569 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
CFTRP13569 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC30.16■■■□□ 2.42
CFTRP13569 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CFTRP13569 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC30.15■■■□□ 2.42
CFTRP13569 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
CFTRP13569 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
CFTRP13569 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CFTRP13569 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CFTRP13569 WRB-204ENST00000398753 699 ntTSL 3 BASIC30.15■■■□□ 2.42
CFTRP13569 NABP1-203ENST00000409510 843 ntTSL 5 BASIC30.15■■■□□ 2.42
CFTRP13569 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC30.15■■■□□ 2.42
CFTRP13569 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
CFTRP13569 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC30.15■■■□□ 2.42
CFTRP13569 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CFTRP13569 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC30.15■■■□□ 2.42
CFTRP13569 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC30.15■■■□□ 2.42
CFTRP13569 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC30.14■■■□□ 2.42
CFTRP13569 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CFTRP13569 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC30.14■■■□□ 2.42
CFTRP13569 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC30.14■■■□□ 2.42
CFTRP13569 AL513480.1-201ENST00000451731 511 ntBASIC30.14■■■□□ 2.42
CFTRP13569 OARD1-208ENST00000469104 704 ntTSL 2 BASIC30.14■■■□□ 2.42
CFTRP13569 MEIS3P1-201ENST00000495167 958 ntBASIC30.14■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms