Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
PEPDP12955 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PEPDP12955 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PEPDP12955 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PEPDP12955 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PEPDP12955 KRT89P-201ENST00000620027 1478 ntBASIC16.49■□□□□ 0.23
PEPDP12955 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PEPDP12955 LINC01126-201ENST00000623515 1646 ntBASIC16.49■□□□□ 0.23
PEPDP12955 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PEPDP12955 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.49■□□□□ 0.23
PEPDP12955 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PEPDP12955 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.49■□□□□ 0.23
PEPDP12955 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PEPDP12955 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PEPDP12955 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PEPDP12955 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.49■□□□□ 0.23
PEPDP12955 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PEPDP12955 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PEPDP12955 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PEPDP12955 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.49■□□□□ 0.23
PEPDP12955 AC011498.5-201ENST00000592027 486 ntBASIC16.49■□□□□ 0.23
PEPDP12955 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PEPDP12955 AL024508.2-201ENST00000607749 1894 ntBASIC16.49■□□□□ 0.23
PEPDP12955 AC069148.1-201ENST00000608741 768 ntBASIC16.49■□□□□ 0.23
PEPDP12955 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.49■□□□□ 0.23
PEPDP12955 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PEPDP12955 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PEPDP12955 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PEPDP12955 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PEPDP12955 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PEPDP12955 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.49■□□□□ 0.23
PEPDP12955 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.49■□□□□ 0.23
PEPDP12955 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PEPDP12955 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PEPDP12955 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.49■□□□□ 0.23
PEPDP12955 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PEPDP12955 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
PEPDP12955 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PEPDP12955 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PEPDP12955 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
PEPDP12955 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PEPDP12955 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PEPDP12955 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PEPDP12955 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PEPDP12955 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
PEPDP12955 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PEPDP12955 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.48■□□□□ 0.23
PEPDP12955 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.48■□□□□ 0.23
PEPDP12955 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PEPDP12955 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PEPDP12955 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PEPDP12955 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PEPDP12955 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PEPDP12955 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.48■□□□□ 0.23
PEPDP12955 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.48■□□□□ 0.23
PEPDP12955 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.48■□□□□ 0.23
PEPDP12955 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.48■□□□□ 0.23
PEPDP12955 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.48■□□□□ 0.23
PEPDP12955 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.48■□□□□ 0.23
PEPDP12955 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PEPDP12955 AL121672.3-201ENST00000608644 468 ntBASIC16.48■□□□□ 0.23
PEPDP12955 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.48■□□□□ 0.23
PEPDP12955 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PEPDP12955 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PEPDP12955 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PEPDP12955 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PEPDP12955 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PEPDP12955 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PEPDP12955 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PEPDP12955 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PEPDP12955 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PEPDP12955 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PEPDP12955 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.48■□□□□ 0.23
PEPDP12955 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PEPDP12955 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.48■□□□□ 0.23
PEPDP12955 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PEPDP12955 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PEPDP12955 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PEPDP12955 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PEPDP12955 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PEPDP12955 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PEPDP12955 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PEPDP12955 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PEPDP12955 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PEPDP12955 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.47■□□□□ 0.23
PEPDP12955 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PEPDP12955 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.47■□□□□ 0.23
PEPDP12955 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PEPDP12955 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PEPDP12955 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PEPDP12955 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.47■□□□□ 0.23
PEPDP12955 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.47■□□□□ 0.23
PEPDP12955 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.47■□□□□ 0.23
PEPDP12955 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PEPDP12955 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PEPDP12955 BX276092.5-203ENST00000456199 560 ntBASIC16.47■□□□□ 0.23
PEPDP12955 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.47■□□□□ 0.23
PEPDP12955 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.47■□□□□ 0.23
PEPDP12955 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.47■□□□□ 0.23
PEPDP12955 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms