Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH1P12830 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CDH1P12830 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.36■□□□□ 0.37
CDH1P12830 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDH1P12830 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH1P12830 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH1P12830 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH1P12830 ARMC10P1-201ENST00000313754 855 ntBASIC17.36■□□□□ 0.37
CDH1P12830 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDH1P12830 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDH1P12830 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH1P12830 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.36■□□□□ 0.37
CDH1P12830 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.36■□□□□ 0.37
CDH1P12830 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.36■□□□□ 0.37
CDH1P12830 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.36■□□□□ 0.37
CDH1P12830 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.36■□□□□ 0.37
CDH1P12830 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CDH1P12830 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.36■□□□□ 0.37
CDH1P12830 DUTP2-201ENST00000519164 463 ntBASIC17.36■□□□□ 0.37
CDH1P12830 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.36■□□□□ 0.37
CDH1P12830 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
CDH1P12830 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
CDH1P12830 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CDH1P12830 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CDH1P12830 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH1P12830 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.36■□□□□ 0.37
CDH1P12830 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CDH1P12830 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.36■□□□□ 0.37
CDH1P12830 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH1P12830 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH1P12830 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH1P12830 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
CDH1P12830 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDH1P12830 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
CDH1P12830 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH1P12830 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDH1P12830 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CDH1P12830 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CDH1P12830 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH1P12830 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.35■□□□□ 0.37
CDH1P12830 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CDH1P12830 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.35■□□□□ 0.37
CDH1P12830 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH1P12830 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH1P12830 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.35■□□□□ 0.37
CDH1P12830 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH1P12830 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH1P12830 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.35■□□□□ 0.37
CDH1P12830 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH1P12830 TSPY22P-201ENST00000427496 604 ntBASIC17.35■□□□□ 0.37
CDH1P12830 KRT18P65-201ENST00000439811 1286 ntBASIC17.35■□□□□ 0.37
CDH1P12830 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.35■□□□□ 0.37
CDH1P12830 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.35■□□□□ 0.37
CDH1P12830 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.35■□□□□ 0.37
CDH1P12830 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.35■□□□□ 0.37
CDH1P12830 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.35■□□□□ 0.37
CDH1P12830 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.35■□□□□ 0.37
CDH1P12830 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CDH1P12830 AC011498.5-201ENST00000592027 486 ntBASIC17.35■□□□□ 0.37
CDH1P12830 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.35■□□□□ 0.37
CDH1P12830 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.35■□□□□ 0.37
CDH1P12830 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH1P12830 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.35■□□□□ 0.37
CDH1P12830 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.35■□□□□ 0.37
CDH1P12830 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH1P12830 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CDH1P12830 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH1P12830 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.35■□□□□ 0.37
CDH1P12830 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH1P12830 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH1P12830 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH1P12830 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.35■□□□□ 0.37
CDH1P12830 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH1P12830 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.35■□□□□ 0.37
CDH1P12830 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH1P12830 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CDH1P12830 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH1P12830 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.35■□□□□ 0.37
CDH1P12830 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CDH1P12830 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH1P12830 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CDH1P12830 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.34■□□□□ 0.37
CDH1P12830 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.34■□□□□ 0.37
CDH1P12830 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDH1P12830 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.34■□□□□ 0.37
CDH1P12830 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH1P12830 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH1P12830 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH1P12830 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CDH1P12830 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH1P12830 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH1P12830 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.34■□□□□ 0.37
CDH1P12830 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDH1P12830 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDH1P12830 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDH1P12830 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.34■□□□□ 0.37
CDH1P12830 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.34■□□□□ 0.37
CDH1P12830 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDH1P12830 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.34■□□□□ 0.37
CDH1P12830 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms