Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
HOXC6P09630 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.99■□□□□ 0.79
HOXC6P09630 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HOXC6P09630 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HOXC6P09630 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HOXC6P09630 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HOXC6P09630 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
HOXC6P09630 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HOXC6P09630 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HOXC6P09630 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HOXC6P09630 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.98■□□□□ 0.79
HOXC6P09630 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.98■□□□□ 0.79
HOXC6P09630 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.98■□□□□ 0.79
HOXC6P09630 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HOXC6P09630 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HOXC6P09630 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HOXC6P09630 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
HOXC6P09630 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
HOXC6P09630 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
HOXC6P09630 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HOXC6P09630 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HOXC6P09630 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.98■□□□□ 0.79
HOXC6P09630 KLF4P1-201ENST00000412782 1185 ntBASIC19.98■□□□□ 0.79
HOXC6P09630 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.98■□□□□ 0.79
HOXC6P09630 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.98■□□□□ 0.79
HOXC6P09630 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.98■□□□□ 0.79
HOXC6P09630 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
HOXC6P09630 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.98■□□□□ 0.79
HOXC6P09630 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.98■□□□□ 0.79
HOXC6P09630 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
HOXC6P09630 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
HOXC6P09630 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
HOXC6P09630 AC019129.2-201ENST00000609837 1235 ntBASIC19.98■□□□□ 0.79
HOXC6P09630 AC010654.1-201ENST00000615722 808 ntBASIC19.98■□□□□ 0.79
HOXC6P09630 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
HOXC6P09630 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HOXC6P09630 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.98■□□□□ 0.79
HOXC6P09630 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HOXC6P09630 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
HOXC6P09630 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.98■□□□□ 0.79
HOXC6P09630 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
HOXC6P09630 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
HOXC6P09630 GPR89P-201ENST00000407924 1495 ntBASIC19.98■□□□□ 0.79
HOXC6P09630 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
HOXC6P09630 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
HOXC6P09630 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HOXC6P09630 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HOXC6P09630 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HOXC6P09630 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.97■□□□□ 0.79
HOXC6P09630 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
HOXC6P09630 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HOXC6P09630 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
HOXC6P09630 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.97■□□□□ 0.79
HOXC6P09630 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.97■□□□□ 0.79
HOXC6P09630 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HOXC6P09630 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HOXC6P09630 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.97■□□□□ 0.79
HOXC6P09630 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.97■□□□□ 0.79
HOXC6P09630 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.97■□□□□ 0.79
HOXC6P09630 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.97■□□□□ 0.79
HOXC6P09630 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HOXC6P09630 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HOXC6P09630 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HOXC6P09630 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HOXC6P09630 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HOXC6P09630 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.97■□□□□ 0.79
HOXC6P09630 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
HOXC6P09630 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
HOXC6P09630 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.97■□□□□ 0.79
HOXC6P09630 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
HOXC6P09630 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.97■□□□□ 0.79
HOXC6P09630 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
HOXC6P09630 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HOXC6P09630 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
HOXC6P09630 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HOXC6P09630 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
HOXC6P09630 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.96■□□□□ 0.79
HOXC6P09630 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HOXC6P09630 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HOXC6P09630 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
HOXC6P09630 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HOXC6P09630 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HOXC6P09630 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.96■□□□□ 0.79
HOXC6P09630 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.96■□□□□ 0.79
HOXC6P09630 AL645939.2-201ENST00000427340 991 ntBASIC19.96■□□□□ 0.79
HOXC6P09630 PDPK2P-202ENST00000562415 1191 ntBASIC19.96■□□□□ 0.79
HOXC6P09630 AP002472.1-201ENST00000577490 586 ntBASIC19.96■□□□□ 0.79
HOXC6P09630 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.96■□□□□ 0.79
HOXC6P09630 AL078644.1-201ENST00000609881 752 ntBASIC19.96■□□□□ 0.79
HOXC6P09630 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HOXC6P09630 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
HOXC6P09630 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.96■□□□□ 0.79
HOXC6P09630 AC004408.2-201ENST00000623613 2777 ntBASIC19.96■□□□□ 0.79
HOXC6P09630 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HOXC6P09630 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
HOXC6P09630 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HOXC6P09630 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HOXC6P09630 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
HOXC6P09630 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HOXC6P09630 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms