Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MYCNP04198 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.42■□□□□ 0.86
MYCNP04198 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MYCNP04198 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.42■□□□□ 0.86
MYCNP04198 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MYCNP04198 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MYCNP04198 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.42■□□□□ 0.86
MYCNP04198 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.42■□□□□ 0.86
MYCNP04198 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MYCNP04198 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC20.42■□□□□ 0.86
MYCNP04198 AC025580.1-201ENST00000559553 729 ntTSL 5 BASIC20.42■□□□□ 0.86
MYCNP04198 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.42■□□□□ 0.86
MYCNP04198 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.42■□□□□ 0.86
MYCNP04198 RN7SL819P-201ENST00000581896 270 ntBASIC20.42■□□□□ 0.86
MYCNP04198 AP001269.4-201ENST00000609611 512 ntBASIC20.42■□□□□ 0.86
MYCNP04198 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC20.42■□□□□ 0.86
MYCNP04198 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.42■□□□□ 0.86
MYCNP04198 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MYCNP04198 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
MYCNP04198 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.42■□□□□ 0.86
MYCNP04198 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
MYCNP04198 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
MYCNP04198 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MYCNP04198 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MYCNP04198 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
MYCNP04198 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.42■□□□□ 0.86
MYCNP04198 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.42■□□□□ 0.86
MYCNP04198 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MYCNP04198 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.41■□□□□ 0.86
MYCNP04198 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.41■□□□□ 0.86
MYCNP04198 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.41■□□□□ 0.86
MYCNP04198 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
MYCNP04198 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
MYCNP04198 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MYCNP04198 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MYCNP04198 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MYCNP04198 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.41■□□□□ 0.86
MYCNP04198 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MYCNP04198 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.41■□□□□ 0.86
MYCNP04198 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.41■□□□□ 0.86
MYCNP04198 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC20.41■□□□□ 0.86
MYCNP04198 AC122713.1-201ENST00000518368 1015 ntBASIC20.41■□□□□ 0.86
MYCNP04198 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.41■□□□□ 0.86
MYCNP04198 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC20.41■□□□□ 0.86
MYCNP04198 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MYCNP04198 AC005336.2-201ENST00000593183 939 ntBASIC20.41■□□□□ 0.86
MYCNP04198 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC20.41■□□□□ 0.86
MYCNP04198 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC20.41■□□□□ 0.86
MYCNP04198 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MYCNP04198 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
MYCNP04198 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.41■□□□□ 0.86
MYCNP04198 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.41■□□□□ 0.86
MYCNP04198 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MYCNP04198 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.41■□□□□ 0.86
MYCNP04198 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.41■□□□□ 0.86
MYCNP04198 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
MYCNP04198 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MYCNP04198 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MYCNP04198 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC20.41■□□□□ 0.86
MYCNP04198 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC20.4■□□□□ 0.86
MYCNP04198 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MYCNP04198 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MYCNP04198 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MYCNP04198 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
MYCNP04198 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MYCNP04198 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.4■□□□□ 0.86
MYCNP04198 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
MYCNP04198 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.4■□□□□ 0.86
MYCNP04198 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.4■□□□□ 0.86
MYCNP04198 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
MYCNP04198 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.4■□□□□ 0.86
MYCNP04198 RPS2P1-201ENST00000434010 821 ntBASIC20.4■□□□□ 0.86
MYCNP04198 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MYCNP04198 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.4■□□□□ 0.86
MYCNP04198 AC092910.1-201ENST00000482027 1129 ntBASIC20.4■□□□□ 0.86
MYCNP04198 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MYCNP04198 AC016550.3-201ENST00000515706 767 ntBASIC20.4■□□□□ 0.86
MYCNP04198 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC20.4■□□□□ 0.86
MYCNP04198 AC021269.1-201ENST00000526860 705 ntBASIC20.4■□□□□ 0.86
MYCNP04198 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.4■□□□□ 0.86
MYCNP04198 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MYCNP04198 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MYCNP04198 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.4■□□□□ 0.86
MYCNP04198 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
MYCNP04198 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC20.4■□□□□ 0.86
MYCNP04198 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MYCNP04198 AC106730.3-201ENST00000624568 641 ntBASIC20.4■□□□□ 0.86
MYCNP04198 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
MYCNP04198 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.4■□□□□ 0.86
MYCNP04198 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MYCNP04198 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
MYCNP04198 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
MYCNP04198 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
MYCNP04198 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
MYCNP04198 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
MYCNP04198 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
MYCNP04198 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
MYCNP04198 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
MYCNP04198 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.39■□□□□ 0.86
MYCNP04198 HEIH-201ENST00000623091 1652 ntBASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms