Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.98■□□□□ 0.79
HMGCRP04035 AC244107.1-201ENST00000442033 332 ntBASIC19.98■□□□□ 0.79
HMGCRP04035 ACTG1P14-201ENST00000446382 1122 ntBASIC19.98■□□□□ 0.79
HMGCRP04035 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.98■□□□□ 0.79
HMGCRP04035 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.98■□□□□ 0.79
HMGCRP04035 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCRP04035 AL096865.1-201ENST00000606796 927 ntBASIC19.98■□□□□ 0.79
HMGCRP04035 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCRP04035 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.98■□□□□ 0.79
HMGCRP04035 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
HMGCRP04035 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCRP04035 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCRP04035 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCRP04035 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
HMGCRP04035 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCRP04035 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.97■□□□□ 0.79
HMGCRP04035 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGCRP04035 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
HMGCRP04035 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.97■□□□□ 0.79
HMGCRP04035 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HMGCRP04035 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGCRP04035 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HMGCRP04035 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.97■□□□□ 0.79
HMGCRP04035 BCRP1-201ENST00000444246 691 ntBASIC19.97■□□□□ 0.79
HMGCRP04035 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.97■□□□□ 0.79
HMGCRP04035 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.97■□□□□ 0.79
HMGCRP04035 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.97■□□□□ 0.79
HMGCRP04035 AC004877.2-201ENST00000623941 599 ntBASIC19.97■□□□□ 0.79
HMGCRP04035 AC010507.1-201ENST00000633895 436 ntBASIC19.97■□□□□ 0.79
HMGCRP04035 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGCRP04035 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
HMGCRP04035 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
HMGCRP04035 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGCRP04035 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGCRP04035 AL353593.2-201ENST00000602529 1483 ntBASIC19.97■□□□□ 0.79
HMGCRP04035 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.97■□□□□ 0.79
HMGCRP04035 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGCRP04035 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
HMGCRP04035 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
HMGCRP04035 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.96■□□□□ 0.79
HMGCRP04035 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGCRP04035 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
HMGCRP04035 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HMGCRP04035 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGCRP04035 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
HMGCRP04035 COX5BP2-201ENST00000392354 334 ntBASIC19.96■□□□□ 0.79
HMGCRP04035 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.96■□□□□ 0.79
HMGCRP04035 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.96■□□□□ 0.79
HMGCRP04035 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
HMGCRP04035 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.96■□□□□ 0.79
HMGCRP04035 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.96■□□□□ 0.79
HMGCRP04035 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
HMGCRP04035 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
HMGCRP04035 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.96■□□□□ 0.79
HMGCRP04035 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
HMGCRP04035 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.96■□□□□ 0.79
HMGCRP04035 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGCRP04035 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGCRP04035 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGCRP04035 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HMGCRP04035 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.96■□□□□ 0.79
HMGCRP04035 BCAR1-209ENST00000546196 1340 ntBASIC19.96■□□□□ 0.79
HMGCRP04035 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
HMGCRP04035 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HMGCRP04035 CROCCP3-202ENST00000420820 1947 ntBASIC19.96■□□□□ 0.79
HMGCRP04035 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
HMGCRP04035 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGCRP04035 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.95■□□□□ 0.78
HMGCRP04035 GMCL1P1-201ENST00000463439 1581 ntBASIC19.95■□□□□ 0.78
HMGCRP04035 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.95■□□□□ 0.78
HMGCRP04035 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HMGCRP04035 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
HMGCRP04035 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.95■□□□□ 0.78
HMGCRP04035 AC148477.5-201ENST00000625164 1645 ntBASIC19.95■□□□□ 0.78
HMGCRP04035 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HMGCRP04035 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
HMGCRP04035 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HMGCRP04035 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
HMGCRP04035 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HMGCRP04035 AL139400.1-201ENST00000366220 510 ntBASIC19.95■□□□□ 0.78
HMGCRP04035 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
HMGCRP04035 MRPL20P1-201ENST00000400819 433 ntBASIC19.95■□□□□ 0.78
HMGCRP04035 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.95■□□□□ 0.78
HMGCRP04035 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.95■□□□□ 0.78
HMGCRP04035 FAM58CP-201ENST00000435741 640 ntBASIC19.95■□□□□ 0.78
HMGCRP04035 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.95■□□□□ 0.78
HMGCRP04035 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.95■□□□□ 0.78
HMGCRP04035 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
HMGCRP04035 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.95■□□□□ 0.78
HMGCRP04035 KRT19P2-202ENST00000557173 1012 ntBASIC19.95■□□□□ 0.78
HMGCRP04035 AC096734.2-201ENST00000562054 433 ntBASIC19.95■□□□□ 0.78
HMGCRP04035 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
HMGCRP04035 AL805961.1-202ENST00000641562 540 ntBASIC19.95■□□□□ 0.78
HMGCRP04035 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
HMGCRP04035 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
HMGCRP04035 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HMGCRP04035 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HMGCRP04035 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.95■□□□□ 0.78
HMGCRP04035 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCRP04035 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms