Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LDLRP01130 FDX1P1-201ENST00000449115 551 ntBASIC17.23■□□□□ 0.35
LDLRP01130 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.23■□□□□ 0.35
LDLRP01130 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.23■□□□□ 0.35
LDLRP01130 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.23■□□□□ 0.35
LDLRP01130 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.23■□□□□ 0.35
LDLRP01130 AC141586.5-201ENST00000624546 2050 ntBASIC17.23■□□□□ 0.35
LDLRP01130 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LDLRP01130 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
LDLRP01130 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
LDLRP01130 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LDLRP01130 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LDLRP01130 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LDLRP01130 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LDLRP01130 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.23■□□□□ 0.35
LDLRP01130 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.23■□□□□ 0.35
LDLRP01130 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LDLRP01130 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LDLRP01130 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.22■□□□□ 0.35
LDLRP01130 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.22■□□□□ 0.35
LDLRP01130 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LDLRP01130 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LDLRP01130 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LDLRP01130 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
LDLRP01130 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
LDLRP01130 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LDLRP01130 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LDLRP01130 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.22■□□□□ 0.35
LDLRP01130 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LDLRP01130 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LDLRP01130 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.22■□□□□ 0.35
LDLRP01130 ZNF444P1-201ENST00000559497 298 ntBASIC17.22■□□□□ 0.35
LDLRP01130 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.22■□□□□ 0.35
LDLRP01130 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.22■□□□□ 0.35
LDLRP01130 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.22■□□□□ 0.35
LDLRP01130 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LDLRP01130 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LDLRP01130 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LDLRP01130 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LDLRP01130 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.22■□□□□ 0.35
LDLRP01130 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
LDLRP01130 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LDLRP01130 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.21■□□□□ 0.35
LDLRP01130 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LDLRP01130 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LDLRP01130 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LDLRP01130 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.21■□□□□ 0.35
LDLRP01130 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LDLRP01130 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LDLRP01130 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LDLRP01130 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LDLRP01130 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LDLRP01130 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LDLRP01130 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.21■□□□□ 0.35
LDLRP01130 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LDLRP01130 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LDLRP01130 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.21■□□□□ 0.35
LDLRP01130 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LDLRP01130 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.21■□□□□ 0.35
LDLRP01130 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.21■□□□□ 0.35
LDLRP01130 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LDLRP01130 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LDLRP01130 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
LDLRP01130 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LDLRP01130 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LDLRP01130 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LDLRP01130 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LDLRP01130 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LDLRP01130 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.21■□□□□ 0.35
LDLRP01130 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LDLRP01130 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.21■□□□□ 0.35
LDLRP01130 PVRIG2P-201ENST00000435460 978 ntBASIC17.21■□□□□ 0.35
LDLRP01130 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.21■□□□□ 0.35
LDLRP01130 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.21■□□□□ 0.35
LDLRP01130 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.21■□□□□ 0.35
LDLRP01130 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.21■□□□□ 0.35
LDLRP01130 RN7SL510P-201ENST00000581311 263 ntBASIC17.21■□□□□ 0.35
LDLRP01130 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.21■□□□□ 0.35
LDLRP01130 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.21■□□□□ 0.35
LDLRP01130 AC083849.1-201ENST00000615227 514 ntBASIC17.21■□□□□ 0.35
LDLRP01130 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LDLRP01130 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.21■□□□□ 0.35
LDLRP01130 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LDLRP01130 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
LDLRP01130 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.21■□□□□ 0.34
LDLRP01130 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LDLRP01130 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.21■□□□□ 0.34
LDLRP01130 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LDLRP01130 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LDLRP01130 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LDLRP01130 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LDLRP01130 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.2■□□□□ 0.34
LDLRP01130 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LDLRP01130 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LDLRP01130 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LDLRP01130 AC006116.8-202ENST00000587620 1550 ntBASIC17.2■□□□□ 0.34
LDLRP01130 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LDLRP01130 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.2■□□□□ 0.34
LDLRP01130 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LDLRP01130 TNRC18P3-201ENST00000441896 2691 ntBASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms