Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRCH4O75427 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRCH4O75427 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
LRCH4O75427 SIRPAP1-201ENST00000448467 1770 ntBASIC18.51■□□□□ 0.55
LRCH4O75427 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
LRCH4O75427 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
LRCH4O75427 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRCH4O75427 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRCH4O75427 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.51■□□□□ 0.55
LRCH4O75427 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRCH4O75427 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
LRCH4O75427 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRCH4O75427 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.51■□□□□ 0.55
LRCH4O75427 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRCH4O75427 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.51■□□□□ 0.55
LRCH4O75427 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRCH4O75427 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRCH4O75427 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRCH4O75427 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRCH4O75427 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.51■□□□□ 0.55
LRCH4O75427 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRCH4O75427 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
LRCH4O75427 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRCH4O75427 AC010460.3-201ENST00000511359 1579 ntBASIC18.51■□□□□ 0.55
LRCH4O75427 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRCH4O75427 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.5■□□□□ 0.55
LRCH4O75427 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.5■□□□□ 0.55
LRCH4O75427 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LRCH4O75427 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRCH4O75427 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRCH4O75427 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.5■□□□□ 0.55
LRCH4O75427 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRCH4O75427 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRCH4O75427 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.5■□□□□ 0.55
LRCH4O75427 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.5■□□□□ 0.55
LRCH4O75427 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRCH4O75427 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRCH4O75427 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRCH4O75427 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.5■□□□□ 0.55
LRCH4O75427 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRCH4O75427 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRCH4O75427 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRCH4O75427 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
LRCH4O75427 AC124864.1-201ENST00000623408 392 ntBASIC18.5■□□□□ 0.55
LRCH4O75427 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.5■□□□□ 0.55
LRCH4O75427 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.5■□□□□ 0.55
LRCH4O75427 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRCH4O75427 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
LRCH4O75427 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.5■□□□□ 0.55
LRCH4O75427 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRCH4O75427 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRCH4O75427 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRCH4O75427 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRCH4O75427 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.5■□□□□ 0.55
LRCH4O75427 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.5■□□□□ 0.55
LRCH4O75427 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LRCH4O75427 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
LRCH4O75427 AC097374.2-201ENST00000618617 1306 ntBASIC18.49■□□□□ 0.55
LRCH4O75427 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRCH4O75427 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.49■□□□□ 0.55
LRCH4O75427 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.49■□□□□ 0.55
LRCH4O75427 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.49■□□□□ 0.55
LRCH4O75427 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRCH4O75427 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
LRCH4O75427 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.49■□□□□ 0.55
LRCH4O75427 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRCH4O75427 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRCH4O75427 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
LRCH4O75427 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRCH4O75427 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRCH4O75427 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRCH4O75427 AC005104.2-201ENST00000427818 678 ntBASIC18.49■□□□□ 0.55
LRCH4O75427 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.49■□□□□ 0.55
LRCH4O75427 AC090616.6-201ENST00000582640 721 ntBASIC18.49■□□□□ 0.55
LRCH4O75427 AC116407.4-201ENST00000623319 1061 ntBASIC18.49■□□□□ 0.55
LRCH4O75427 AL590326.2-201ENST00000625139 305 ntBASIC18.49■□□□□ 0.55
LRCH4O75427 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRCH4O75427 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
LRCH4O75427 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRCH4O75427 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRCH4O75427 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRCH4O75427 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRCH4O75427 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRCH4O75427 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRCH4O75427 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRCH4O75427 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.49■□□□□ 0.55
LRCH4O75427 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.49■□□□□ 0.55
LRCH4O75427 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRCH4O75427 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRCH4O75427 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRCH4O75427 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.48■□□□□ 0.55
LRCH4O75427 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRCH4O75427 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.48■□□□□ 0.55
LRCH4O75427 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRCH4O75427 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRCH4O75427 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRCH4O75427 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRCH4O75427 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRCH4O75427 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
LRCH4O75427 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms