Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.99■□□□□ 0.47
CDH16O75309 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.99■□□□□ 0.47
CDH16O75309 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.99■□□□□ 0.47
CDH16O75309 UBALD1-205ENST00000590891 2641 ntBASIC17.99■□□□□ 0.47
CDH16O75309 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.99■□□□□ 0.47
CDH16O75309 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CDH16O75309 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH16O75309 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDH16O75309 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH16O75309 CRYGFP-201ENST00000418459 633 ntBASIC17.99■□□□□ 0.47
CDH16O75309 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.99■□□□□ 0.47
CDH16O75309 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.99■□□□□ 0.47
CDH16O75309 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.99■□□□□ 0.47
CDH16O75309 AP003041.3-201ENST00000527151 707 ntBASIC17.99■□□□□ 0.47
CDH16O75309 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.99■□□□□ 0.47
CDH16O75309 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDH16O75309 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.99■□□□□ 0.47
CDH16O75309 AC010240.3-201ENST00000607688 395 ntBASIC17.99■□□□□ 0.47
CDH16O75309 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH16O75309 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH16O75309 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CDH16O75309 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.99■□□□□ 0.47
CDH16O75309 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDH16O75309 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CDH16O75309 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH16O75309 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH16O75309 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH16O75309 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CDH16O75309 LINC00167-201ENST00000530583 1419 ntBASIC17.98■□□□□ 0.47
CDH16O75309 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CDH16O75309 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH16O75309 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH16O75309 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH16O75309 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH16O75309 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
CDH16O75309 OR6D1P-203ENST00000641209 4860 ntBASIC17.98■□□□□ 0.47
CDH16O75309 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH16O75309 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH16O75309 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.98■□□□□ 0.47
CDH16O75309 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH16O75309 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH16O75309 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CDH16O75309 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH16O75309 AC012618.2-201ENST00000428058 849 ntBASIC17.98■□□□□ 0.47
CDH16O75309 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CDH16O75309 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.98■□□□□ 0.47
CDH16O75309 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH16O75309 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.98■□□□□ 0.47
CDH16O75309 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.98■□□□□ 0.47
CDH16O75309 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.98■□□□□ 0.47
CDH16O75309 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CDH16O75309 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.98■□□□□ 0.47
CDH16O75309 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH16O75309 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.98■□□□□ 0.47
CDH16O75309 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.98■□□□□ 0.47
CDH16O75309 AL023803.3-201ENST00000615559 522 ntBASIC17.98■□□□□ 0.47
CDH16O75309 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH16O75309 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CDH16O75309 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
CDH16O75309 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.98■□□□□ 0.47
CDH16O75309 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH16O75309 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH16O75309 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
CDH16O75309 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH16O75309 AC105020.1-201ENST00000435356 2205 ntBASIC17.98■□□□□ 0.47
CDH16O75309 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH16O75309 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH16O75309 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH16O75309 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH16O75309 PCDHB19P-201ENST00000570871 2371 ntBASIC17.97■□□□□ 0.47
CDH16O75309 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH16O75309 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CDH16O75309 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH16O75309 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH16O75309 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
CDH16O75309 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CDH16O75309 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH16O75309 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.97■□□□□ 0.47
CDH16O75309 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH16O75309 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH16O75309 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH16O75309 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.97■□□□□ 0.47
CDH16O75309 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.97■□□□□ 0.47
CDH16O75309 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.97■□□□□ 0.47
CDH16O75309 DDX43P3-201ENST00000441064 443 ntBASIC17.97■□□□□ 0.47
CDH16O75309 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.97■□□□□ 0.47
CDH16O75309 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.97■□□□□ 0.47
CDH16O75309 AC008550.1-201ENST00000511500 884 ntBASIC17.97■□□□□ 0.47
CDH16O75309 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.97■□□□□ 0.47
CDH16O75309 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.97■□□□□ 0.47
CDH16O75309 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.97■□□□□ 0.47
CDH16O75309 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.97■□□□□ 0.47
CDH16O75309 AC066615.1-201ENST00000640911 628 ntBASIC17.97■□□□□ 0.47
CDH16O75309 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.97■□□□□ 0.47
CDH16O75309 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH16O75309 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH16O75309 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH16O75309 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH16O75309 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH16O75309 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms