Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
URB1O60287 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
URB1O60287 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
URB1O60287 MRPL20P1-201ENST00000400819 433 ntBASIC16.8■□□□□ 0.28
URB1O60287 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
URB1O60287 AC092474.2-201ENST00000424288 719 ntBASIC16.8■□□□□ 0.28
URB1O60287 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.8■□□□□ 0.28
URB1O60287 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.8■□□□□ 0.28
URB1O60287 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.8■□□□□ 0.28
URB1O60287 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.8■□□□□ 0.28
URB1O60287 AF228730.6-201ENST00000641497 218 ntBASIC16.8■□□□□ 0.28
URB1O60287 AC084121.3-201ENST00000641716 218 ntBASIC16.8■□□□□ 0.28
URB1O60287 AC105233.6-201ENST00000642093 218 ntBASIC16.8■□□□□ 0.28
URB1O60287 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
URB1O60287 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
URB1O60287 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.79■□□□□ 0.28
URB1O60287 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
URB1O60287 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
URB1O60287 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
URB1O60287 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
URB1O60287 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
URB1O60287 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
URB1O60287 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
URB1O60287 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
URB1O60287 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
URB1O60287 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.79■□□□□ 0.28
URB1O60287 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
URB1O60287 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
URB1O60287 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
URB1O60287 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
URB1O60287 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.79■□□□□ 0.28
URB1O60287 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.79■□□□□ 0.28
URB1O60287 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.79■□□□□ 0.28
URB1O60287 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.79■□□□□ 0.28
URB1O60287 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.79■□□□□ 0.28
URB1O60287 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.79■□□□□ 0.28
URB1O60287 AL022326.1-202ENST00000641533 845 ntBASIC16.79■□□□□ 0.28
URB1O60287 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
URB1O60287 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
URB1O60287 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.79■□□□□ 0.28
URB1O60287 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
URB1O60287 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
URB1O60287 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
URB1O60287 AL049812.1-201ENST00000432563 2267 ntBASIC16.79■□□□□ 0.28
URB1O60287 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
URB1O60287 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
URB1O60287 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
URB1O60287 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
URB1O60287 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
URB1O60287 AL031432.2-201ENST00000566714 459 ntBASIC16.79■□□□□ 0.28
URB1O60287 AL928711.1-201ENST00000570165 459 ntBASIC16.79■□□□□ 0.28
URB1O60287 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.79■□□□□ 0.28
URB1O60287 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.79■□□□□ 0.28
URB1O60287 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
URB1O60287 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.78■□□□□ 0.28
URB1O60287 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
URB1O60287 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
URB1O60287 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.78■□□□□ 0.28
URB1O60287 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
URB1O60287 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
URB1O60287 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
URB1O60287 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.78■□□□□ 0.28
URB1O60287 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
URB1O60287 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
URB1O60287 FP475955.4-201ENST00000623131 1990 ntBASIC16.78■□□□□ 0.28
URB1O60287 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
URB1O60287 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
URB1O60287 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
URB1O60287 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.78■□□□□ 0.28
URB1O60287 AP000344.2-201ENST00000512987 629 ntBASIC16.78■□□□□ 0.28
URB1O60287 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.78■□□□□ 0.28
URB1O60287 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.78■□□□□ 0.28
URB1O60287 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
URB1O60287 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
URB1O60287 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
URB1O60287 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
URB1O60287 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.78■□□□□ 0.28
URB1O60287 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
URB1O60287 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
URB1O60287 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
URB1O60287 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
URB1O60287 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
URB1O60287 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
URB1O60287 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
URB1O60287 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
URB1O60287 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.78■□□□□ 0.28
URB1O60287 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
URB1O60287 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.78■□□□□ 0.28
URB1O60287 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.78■□□□□ 0.28
URB1O60287 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
URB1O60287 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
URB1O60287 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
URB1O60287 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.77■□□□□ 0.28
URB1O60287 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
URB1O60287 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.77■□□□□ 0.28
URB1O60287 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
URB1O60287 AC008687.5-201ENST00000593746 558 ntBASIC16.77■□□□□ 0.28
URB1O60287 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.77■□□□□ 0.28
URB1O60287 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
URB1O60287 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms