Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FOXS1O43638 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FOXS1O43638 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.72■□□□□ 0.27
FOXS1O43638 RBM17P3-201ENST00000417687 1192 ntBASIC16.72■□□□□ 0.27
FOXS1O43638 AC103564.2-201ENST00000432853 1299 ntBASIC16.72■□□□□ 0.27
FOXS1O43638 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.72■□□□□ 0.27
FOXS1O43638 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.72■□□□□ 0.27
FOXS1O43638 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
FOXS1O43638 AC008608.2-201ENST00000606089 416 ntBASIC16.72■□□□□ 0.27
FOXS1O43638 AC019129.2-201ENST00000609837 1235 ntBASIC16.72■□□□□ 0.27
FOXS1O43638 AL355877.3-201ENST00000622820 899 ntBASIC16.72■□□□□ 0.27
FOXS1O43638 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FOXS1O43638 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.72■□□□□ 0.27
FOXS1O43638 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.72■□□□□ 0.27
FOXS1O43638 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.72■□□□□ 0.27
FOXS1O43638 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FOXS1O43638 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
FOXS1O43638 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.72■□□□□ 0.27
FOXS1O43638 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.72■□□□□ 0.27
FOXS1O43638 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
FOXS1O43638 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.72■□□□□ 0.27
FOXS1O43638 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
FOXS1O43638 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
FOXS1O43638 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FOXS1O43638 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
FOXS1O43638 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.71■□□□□ 0.27
FOXS1O43638 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
FOXS1O43638 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
FOXS1O43638 NOC2LP2-201ENST00000407594 1944 ntBASIC16.71■□□□□ 0.27
FOXS1O43638 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FOXS1O43638 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.71■□□□□ 0.27
FOXS1O43638 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
FOXS1O43638 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
FOXS1O43638 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FOXS1O43638 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.71■□□□□ 0.27
FOXS1O43638 FGFR3P6-201ENST00000457012 610 ntBASIC16.71■□□□□ 0.27
FOXS1O43638 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
FOXS1O43638 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.71■□□□□ 0.27
FOXS1O43638 AL160237.2-201ENST00000556165 472 ntBASIC16.71■□□□□ 0.27
FOXS1O43638 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.71■□□□□ 0.27
FOXS1O43638 MTDHP3-201ENST00000594186 672 ntBASIC16.71■□□□□ 0.27
FOXS1O43638 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.71■□□□□ 0.27
FOXS1O43638 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FOXS1O43638 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
FOXS1O43638 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FOXS1O43638 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
FOXS1O43638 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
FOXS1O43638 AC006116.8-202ENST00000587620 1550 ntBASIC16.71■□□□□ 0.27
FOXS1O43638 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
FOXS1O43638 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.71■□□□□ 0.27
FOXS1O43638 AC008764.6-201ENST00000595909 2069 ntBASIC16.71■□□□□ 0.27
FOXS1O43638 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.71■□□□□ 0.27
FOXS1O43638 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
FOXS1O43638 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
FOXS1O43638 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.7■□□□□ 0.26
FOXS1O43638 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.7■□□□□ 0.26
FOXS1O43638 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXS1O43638 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXS1O43638 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXS1O43638 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXS1O43638 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXS1O43638 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.7■□□□□ 0.26
FOXS1O43638 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.7■□□□□ 0.26
FOXS1O43638 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.7■□□□□ 0.26
FOXS1O43638 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXS1O43638 PMPCAP1-201ENST00000508114 1576 ntBASIC16.7■□□□□ 0.26
FOXS1O43638 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FOXS1O43638 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXS1O43638 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FOXS1O43638 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
FOXS1O43638 AC026396.1-201ENST00000419388 421 ntBASIC16.7■□□□□ 0.26
FOXS1O43638 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.7■□□□□ 0.26
FOXS1O43638 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.7■□□□□ 0.26
FOXS1O43638 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
FOXS1O43638 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.7■□□□□ 0.26
FOXS1O43638 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.7■□□□□ 0.26
FOXS1O43638 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
FOXS1O43638 TP73-AS1-207ENST00000624167 988 ntBASIC16.7■□□□□ 0.26
FOXS1O43638 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.7■□□□□ 0.26
FOXS1O43638 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.7■□□□□ 0.26
FOXS1O43638 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.7■□□□□ 0.26
FOXS1O43638 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
FOXS1O43638 KRT8P10-201ENST00000450021 1447 ntBASIC16.7■□□□□ 0.26
FOXS1O43638 AC012317.2-201ENST00000623305 2251 ntBASIC16.7■□□□□ 0.26
FOXS1O43638 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.7■□□□□ 0.26
FOXS1O43638 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
FOXS1O43638 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.69■□□□□ 0.26
FOXS1O43638 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.69■□□□□ 0.26
FOXS1O43638 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
FOXS1O43638 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXS1O43638 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.69■□□□□ 0.26
FOXS1O43638 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
FOXS1O43638 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXS1O43638 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.69■□□□□ 0.26
FOXS1O43638 AL353593.2-201ENST00000602529 1483 ntBASIC16.69■□□□□ 0.26
FOXS1O43638 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
FOXS1O43638 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.69■□□□□ 0.26
FOXS1O43638 REXO1L11P-201ENST00000620964 1927 ntBASIC16.69■□□□□ 0.26
FOXS1O43638 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXS1O43638 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms