Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RIPK2O43353 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RIPK2O43353 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.08■□□□□ 0.48
RIPK2O43353 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RIPK2O43353 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RIPK2O43353 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RIPK2O43353 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.08■□□□□ 0.48
RIPK2O43353 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.08■□□□□ 0.48
RIPK2O43353 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RIPK2O43353 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RIPK2O43353 AC008687.5-201ENST00000593746 558 ntBASIC18.08■□□□□ 0.48
RIPK2O43353 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
RIPK2O43353 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RIPK2O43353 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.08■□□□□ 0.48
RIPK2O43353 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RIPK2O43353 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.08■□□□□ 0.48
RIPK2O43353 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
RIPK2O43353 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RIPK2O43353 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RIPK2O43353 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
RIPK2O43353 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RIPK2O43353 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RIPK2O43353 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RIPK2O43353 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RIPK2O43353 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RIPK2O43353 AC092338.2-201ENST00000568827 1415 ntBASIC18.07■□□□□ 0.48
RIPK2O43353 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RIPK2O43353 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.07■□□□□ 0.48
RIPK2O43353 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RIPK2O43353 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RIPK2O43353 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RIPK2O43353 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
RIPK2O43353 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RIPK2O43353 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
RIPK2O43353 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RIPK2O43353 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RIPK2O43353 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RIPK2O43353 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RIPK2O43353 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.07■□□□□ 0.48
RIPK2O43353 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.07■□□□□ 0.48
RIPK2O43353 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.07■□□□□ 0.48
RIPK2O43353 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RIPK2O43353 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RIPK2O43353 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.07■□□□□ 0.48
RIPK2O43353 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
RIPK2O43353 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RIPK2O43353 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RIPK2O43353 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RIPK2O43353 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RIPK2O43353 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RIPK2O43353 PCDH8P1-201ENST00000428983 2773 ntBASIC18.07■□□□□ 0.48
RIPK2O43353 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RIPK2O43353 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.06■□□□□ 0.48
RIPK2O43353 AC016396.2-201ENST00000562575 1417 ntBASIC18.06■□□□□ 0.48
RIPK2O43353 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RIPK2O43353 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RIPK2O43353 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.06■□□□□ 0.48
RIPK2O43353 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RIPK2O43353 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RIPK2O43353 ID1-201ENST00000376105 1233 ntBASIC18.06■□□□□ 0.48
RIPK2O43353 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
RIPK2O43353 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RIPK2O43353 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.06■□□□□ 0.48
RIPK2O43353 SEC1P-202ENST00000473944 940 ntBASIC18.06■□□□□ 0.48
RIPK2O43353 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.06■□□□□ 0.48
RIPK2O43353 AC092666.2-201ENST00000613287 246 ntBASIC18.06■□□□□ 0.48
RIPK2O43353 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RIPK2O43353 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RIPK2O43353 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RIPK2O43353 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.06■□□□□ 0.48
RIPK2O43353 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RIPK2O43353 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.06■□□□□ 0.48
RIPK2O43353 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RIPK2O43353 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.06■□□□□ 0.48
RIPK2O43353 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RIPK2O43353 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.06■□□□□ 0.48
RIPK2O43353 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RIPK2O43353 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
RIPK2O43353 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.06■□□□□ 0.48
RIPK2O43353 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RIPK2O43353 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.05■□□□□ 0.48
RIPK2O43353 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RIPK2O43353 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RIPK2O43353 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RIPK2O43353 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
RIPK2O43353 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RIPK2O43353 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.05■□□□□ 0.48
RIPK2O43353 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.05■□□□□ 0.48
RIPK2O43353 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RIPK2O43353 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RIPK2O43353 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RIPK2O43353 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.05■□□□□ 0.48
RIPK2O43353 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
RIPK2O43353 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.05■□□□□ 0.48
RIPK2O43353 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.05■□□□□ 0.48
RIPK2O43353 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.05■□□□□ 0.48
RIPK2O43353 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.05■□□□□ 0.48
RIPK2O43353 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.05■□□□□ 0.48
RIPK2O43353 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.05■□□□□ 0.48
RIPK2O43353 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms