Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RRP8O43159 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.68■□□□□ 0.26
RRP8O43159 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RRP8O43159 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RRP8O43159 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RRP8O43159 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RRP8O43159 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RRP8O43159 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RRP8O43159 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.67■□□□□ 0.26
RRP8O43159 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.67■□□□□ 0.26
RRP8O43159 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.67■□□□□ 0.26
RRP8O43159 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RRP8O43159 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
RRP8O43159 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RRP8O43159 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RRP8O43159 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RRP8O43159 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RRP8O43159 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RRP8O43159 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
RRP8O43159 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.67■□□□□ 0.26
RRP8O43159 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.67■□□□□ 0.26
RRP8O43159 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.67■□□□□ 0.26
RRP8O43159 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.67■□□□□ 0.26
RRP8O43159 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.67■□□□□ 0.26
RRP8O43159 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RRP8O43159 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RRP8O43159 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.67■□□□□ 0.26
RRP8O43159 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.67■□□□□ 0.26
RRP8O43159 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.67■□□□□ 0.26
RRP8O43159 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RRP8O43159 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.67■□□□□ 0.26
RRP8O43159 AC138761.1-201ENST00000584393 385 ntBASIC16.67■□□□□ 0.26
RRP8O43159 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RRP8O43159 AC027612.4-201ENST00000605371 583 ntBASIC16.67■□□□□ 0.26
RRP8O43159 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RRP8O43159 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RRP8O43159 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RRP8O43159 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
RRP8O43159 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RRP8O43159 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RRP8O43159 SDHAP2-201ENST00000455183 2001 ntBASIC16.67■□□□□ 0.26
RRP8O43159 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RRP8O43159 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.67■□□□□ 0.26
RRP8O43159 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RRP8O43159 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.67■□□□□ 0.26
RRP8O43159 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RRP8O43159 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
RRP8O43159 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
RRP8O43159 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RRP8O43159 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.66■□□□□ 0.26
RRP8O43159 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RRP8O43159 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.66■□□□□ 0.26
RRP8O43159 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RRP8O43159 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
RRP8O43159 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RRP8O43159 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RRP8O43159 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RRP8O43159 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RRP8O43159 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RRP8O43159 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RRP8O43159 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
RRP8O43159 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RRP8O43159 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RRP8O43159 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.66■□□□□ 0.26
RRP8O43159 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RRP8O43159 AC007967.3-201ENST00000434308 558 ntBASIC16.66■□□□□ 0.26
RRP8O43159 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.66■□□□□ 0.26
RRP8O43159 HCG4B-203ENST00000450128 991 ntBASIC16.66■□□□□ 0.26
RRP8O43159 AC108073.2-201ENST00000464002 357 ntBASIC16.66■□□□□ 0.26
RRP8O43159 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.66■□□□□ 0.26
RRP8O43159 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
RRP8O43159 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.66■□□□□ 0.26
RRP8O43159 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.66■□□□□ 0.26
RRP8O43159 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.66■□□□□ 0.26
RRP8O43159 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.66■□□□□ 0.26
RRP8O43159 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
RRP8O43159 SIGLEC16-201ENST00000599858 1437 ntBASIC16.66■□□□□ 0.26
RRP8O43159 AC004835.2-201ENST00000603762 682 ntBASIC16.66■□□□□ 0.26
RRP8O43159 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.66■□□□□ 0.26
RRP8O43159 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RRP8O43159 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RRP8O43159 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.66■□□□□ 0.26
RRP8O43159 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.66■□□□□ 0.26
RRP8O43159 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RRP8O43159 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RRP8O43159 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RRP8O43159 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RRP8O43159 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.66■□□□□ 0.26
RRP8O43159 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RRP8O43159 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.65■□□□□ 0.26
RRP8O43159 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.65■□□□□ 0.26
RRP8O43159 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RRP8O43159 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RRP8O43159 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.65■□□□□ 0.26
RRP8O43159 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RRP8O43159 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.65■□□□□ 0.26
RRP8O43159 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RRP8O43159 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RRP8O43159 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.65■□□□□ 0.26
RRP8O43159 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms