Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTCAO00442 AL355312.1-201ENST00000407115 2176 ntBASIC16.99■□□□□ 0.31
RTCAO00442 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTCAO00442 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTCAO00442 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTCAO00442 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RTCAO00442 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RTCAO00442 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
RTCAO00442 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTCAO00442 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RTCAO00442 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTCAO00442 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTCAO00442 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RTCAO00442 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RTCAO00442 RN7SL606P-201ENST00000472779 293 ntBASIC16.99■□□□□ 0.31
RTCAO00442 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.99■□□□□ 0.31
RTCAO00442 GUSBP12-201ENST00000513727 720 ntBASIC16.99■□□□□ 0.31
RTCAO00442 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.99■□□□□ 0.31
RTCAO00442 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTCAO00442 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTCAO00442 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTCAO00442 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTCAO00442 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTCAO00442 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTCAO00442 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RTCAO00442 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.99■□□□□ 0.31
RTCAO00442 AC016734.2-201ENST00000624325 1377 ntBASIC16.99■□□□□ 0.31
RTCAO00442 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RTCAO00442 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RTCAO00442 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
RTCAO00442 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.99■□□□□ 0.31
RTCAO00442 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.99■□□□□ 0.31
RTCAO00442 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTCAO00442 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
RTCAO00442 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTCAO00442 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTCAO00442 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
RTCAO00442 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTCAO00442 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
RTCAO00442 LETM1P2-201ENST00000597330 2178 ntBASIC16.98■□□□□ 0.31
RTCAO00442 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTCAO00442 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTCAO00442 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RTCAO00442 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.98■□□□□ 0.31
RTCAO00442 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTCAO00442 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RTCAO00442 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTCAO00442 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
RTCAO00442 BX276092.5-203ENST00000456199 560 ntBASIC16.98■□□□□ 0.31
RTCAO00442 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.98■□□□□ 0.31
RTCAO00442 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.98■□□□□ 0.31
RTCAO00442 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.98■□□□□ 0.31
RTCAO00442 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTCAO00442 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RTCAO00442 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
RTCAO00442 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTCAO00442 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTCAO00442 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
RTCAO00442 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTCAO00442 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.98■□□□□ 0.31
RTCAO00442 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RTCAO00442 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.98■□□□□ 0.31
RTCAO00442 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
RTCAO00442 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTCAO00442 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTCAO00442 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.98■□□□□ 0.31
RTCAO00442 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTCAO00442 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTCAO00442 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTCAO00442 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.97■□□□□ 0.31
RTCAO00442 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.97■□□□□ 0.31
RTCAO00442 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTCAO00442 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTCAO00442 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RTCAO00442 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
RTCAO00442 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RTCAO00442 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTCAO00442 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTCAO00442 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTCAO00442 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RTCAO00442 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RTCAO00442 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
RTCAO00442 AL845331.1-201ENST00000424978 1190 ntBASIC16.97■□□□□ 0.31
RTCAO00442 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.97■□□□□ 0.31
RTCAO00442 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.97■□□□□ 0.31
RTCAO00442 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RTCAO00442 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RTCAO00442 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.97■□□□□ 0.31
RTCAO00442 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.97■□□□□ 0.31
RTCAO00442 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RTCAO00442 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.97■□□□□ 0.31
RTCAO00442 AL121672.3-201ENST00000608644 468 ntBASIC16.97■□□□□ 0.31
RTCAO00442 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RTCAO00442 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTCAO00442 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RTCAO00442 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RTCAO00442 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RTCAO00442 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTCAO00442 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTCAO00442 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms