Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.05■□□□□ 0.64
FOXN3O00409 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.05■□□□□ 0.64
FOXN3O00409 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.05■□□□□ 0.64
FOXN3O00409 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXN3O00409 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.05■□□□□ 0.64
FOXN3O00409 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXN3O00409 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
FOXN3O00409 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.05■□□□□ 0.64
FOXN3O00409 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
FOXN3O00409 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXN3O00409 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXN3O00409 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
FOXN3O00409 AC106820.2-201ENST00000563775 3264 ntBASIC19.05■□□□□ 0.64
FOXN3O00409 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.04■□□□□ 0.64
FOXN3O00409 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXN3O00409 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXN3O00409 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXN3O00409 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXN3O00409 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXN3O00409 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
FOXN3O00409 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
FOXN3O00409 SIRPAP1-201ENST00000448467 1770 ntBASIC19.04■□□□□ 0.64
FOXN3O00409 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
FOXN3O00409 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXN3O00409 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.04■□□□□ 0.64
FOXN3O00409 RN7SL606P-201ENST00000472779 293 ntBASIC19.04■□□□□ 0.64
FOXN3O00409 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.04■□□□□ 0.64
FOXN3O00409 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.04■□□□□ 0.64
FOXN3O00409 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXN3O00409 AL049597.2-201ENST00000565575 961 ntBASIC19.04■□□□□ 0.64
FOXN3O00409 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.04■□□□□ 0.64
FOXN3O00409 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
FOXN3O00409 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.04■□□□□ 0.64
FOXN3O00409 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.04■□□□□ 0.64
FOXN3O00409 NTF6B-201ENST00000591913 560 ntBASIC19.04■□□□□ 0.64
FOXN3O00409 AC011498.5-201ENST00000592027 486 ntBASIC19.04■□□□□ 0.64
FOXN3O00409 AL138688.1-201ENST00000624851 1594 ntBASIC19.04■□□□□ 0.64
FOXN3O00409 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.04■□□□□ 0.64
FOXN3O00409 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
FOXN3O00409 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.04■□□□□ 0.64
FOXN3O00409 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
FOXN3O00409 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXN3O00409 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXN3O00409 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
FOXN3O00409 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.03■□□□□ 0.64
FOXN3O00409 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXN3O00409 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXN3O00409 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
FOXN3O00409 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.03■□□□□ 0.64
FOXN3O00409 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.03■□□□□ 0.64
FOXN3O00409 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.03■□□□□ 0.64
FOXN3O00409 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
FOXN3O00409 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXN3O00409 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
FOXN3O00409 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
FOXN3O00409 FAM210CP-201ENST00000445714 574 ntBASIC19.03■□□□□ 0.64
FOXN3O00409 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
FOXN3O00409 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.03■□□□□ 0.64
FOXN3O00409 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
FOXN3O00409 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
FOXN3O00409 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.03■□□□□ 0.64
FOXN3O00409 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.03■□□□□ 0.64
FOXN3O00409 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
FOXN3O00409 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXN3O00409 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXN3O00409 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXN3O00409 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXN3O00409 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXN3O00409 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXN3O00409 BCL2-203ENST00000589955 5011 ntBASIC19.02■□□□□ 0.64
FOXN3O00409 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXN3O00409 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
FOXN3O00409 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.02■□□□□ 0.64
FOXN3O00409 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.02■□□□□ 0.64
FOXN3O00409 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
FOXN3O00409 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.02■□□□□ 0.64
FOXN3O00409 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXN3O00409 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXN3O00409 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXN3O00409 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
FOXN3O00409 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.02■□□□□ 0.64
FOXN3O00409 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.02■□□□□ 0.64
FOXN3O00409 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXN3O00409 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.02■□□□□ 0.64
FOXN3O00409 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.02■□□□□ 0.64
FOXN3O00409 AC096633.1-201ENST00000422446 749 ntBASIC19.02■□□□□ 0.64
FOXN3O00409 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXN3O00409 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
FOXN3O00409 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
FOXN3O00409 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.02■□□□□ 0.64
FOXN3O00409 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
FOXN3O00409 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.02■□□□□ 0.64
FOXN3O00409 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
FOXN3O00409 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
FOXN3O00409 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
FOXN3O00409 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.02■□□□□ 0.63
FOXN3O00409 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
FOXN3O00409 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.02■□□□□ 0.63
FOXN3O00409 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXN3O00409 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms